XLOC_027202


Basic Information

Item Value
gene id XLOC_027202
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 14150060 ~ 14158028 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057137
TTAAACATGAATAACAGGAACACAAGAGAGCAGATCAGTGTGTTAATGAGCGCCACCTTGTGGACAATAAGTCTACTTGCATtcacacatgaaaacatcagCAGGACttttaaacacagctgtgtgaTCCTGATCCTGCTGAGCTGCTCTCCTGAGTTTAGCTCTGATTTCTTTACTCAATAAGAATGTTTGAACAATAACAGAAATGCATTAATACTTTTAAATTACTCAAAAGACTGAATTAATCAATTTACAATGACAATCTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057137 True 266 lncRNA 0.36 2 14150060 14158028

Neighbor

gene id symbol gene type direction distance location
XLOC_027201 CU469420.2 coding upstream 30501 14116366 ~ 14119559 (+)
XLOC_027200 CU469420.1 coding upstream 41250 14106511 ~ 14108810 (+)
XLOC_027199 pphln1 coding upstream 186620 13901458 ~ 13963440 (+)
XLOC_027198 NA coding upstream 259969 13876904 ~ 13890091 (+)
XLOC_027197 pdzrn4 coding upstream 288615 13810811 ~ 13861445 (+)
XLOC_027203 NA coding downstream 4315 14162343 ~ 14167862 (+)
XLOC_027204 CR786571.4 coding downstream 16339 14174367 ~ 14176401 (+)
XLOC_027205 NA coding downstream 27138 14185166 ~ 14188729 (+)
XLOC_027206 prl2 coding downstream 185678 14343706 ~ 14348811 (+)
XLOC_027207 nuak1a coding downstream 202344 14360372 ~ 14372843 (+)
XLOC_027191 NA non-coding upstream 563877 13584054 ~ 13586183 (+)
XLOC_027189 NA non-coding upstream 656704 13489682 ~ 13493356 (+)
XLOC_027208 BX571705.1 non-coding downstream 241444 14399472 ~ 14408298 (+)
XLOC_027211 BX571719.2 non-coding downstream 567046 14725074 ~ 14725214 (+)

Expression


Co-expression Network