Gene
RNA
| Item | Value |
|---|---|
| gene id | G819873 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 54688528 ~ 54688747 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU932350 | True | 220 | lncRNA | 0.46 | 1 | 54688528 | 54688747 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532395 | LOC106571990 | coding | upstream | 382355 | 54295022 ~ 54306173 (+) |
| LOC110532396 | LOC106571991 | coding | upstream | 440613 | 54245323 ~ 54249584 (+) |
| LOC110532392 | dffb | coding | upstream | 449022 | 54234796 ~ 54239506 (+) |
| LOC118966073 | NA | coding | upstream | 455081 | 54231749 ~ 54233447 (+) |
| LOC110532391 | LOC106571996 | coding | upstream | 1015030 | 53596083 ~ 53676213 (+) |
| twist3 | LOC106572367 | coding | downstream | 237981 | 54926728 ~ 54934570 (+) |
| LOC110532404 | LOC106572363 | coding | downstream | 503606 | 55192353 ~ 55207365 (+) |
| LOC110532406 | LOC106572360 | coding | downstream | 528859 | 55217606 ~ 55224372 (+) |
| LOC110532408 | ctbl1 | coding | downstream | 639365 | 55328112 ~ 55372587 (+) |
| LOC110532409 | LOC106572359 | coding | downstream | 686428 | 55375175 ~ 55410299 (+) |
| G819869 | NA | non-coding | upstream | 7709 | 54680349 ~ 54680819 (+) |
| G819868 | NA | non-coding | upstream | 8201 | 54680105 ~ 54680327 (+) |
| G819838 | NA | non-coding | upstream | 79667 | 54608570 ~ 54608861 (+) |
| G819836 | NA | non-coding | upstream | 82332 | 54605985 ~ 54606196 (+) |
| G819835 | NA | non-coding | upstream | 84192 | 54604135 ~ 54604336 (+) |
| G819877 | NA | non-coding | downstream | 5456 | 54694203 ~ 54694442 (+) |
| G819878 | NA | non-coding | downstream | 6423 | 54695170 ~ 54696414 (+) |
| G819882 | NA | non-coding | downstream | 16880 | 54705627 ~ 54705857 (+) |
| G819885 | NA | non-coding | downstream | 19851 | 54708598 ~ 54708853 (+) |
| G819893 | NA | non-coding | downstream | 31880 | 54720627 ~ 54720831 (+) |
| LOC110532368 | LOC106572016 | other | upstream | 1961008 | 52692676 ~ 52734929 (+) |
| LOC110532349 | LOC106591969 | other | upstream | 2362888 | 52323001 ~ 52325924 (+) |
| G815767 | casz1 | other | upstream | 3342034 | 51345372 ~ 51346494 (+) |
| G815610 | NA | other | upstream | 3609586 | 51078447 ~ 51078942 (+) |
| G815428 | NA | other | upstream | 3888147 | 50796214 ~ 50800381 (+) |
| G819897 | NA | other | downstream | 38124 | 54726871 ~ 54727376 (+) |
| G820665 | NA | other | downstream | 544511 | 55233258 ~ 55233798 (+) |
| dlgap4a | dlgap4 | other | downstream | 842290 | 55531033 ~ 55647541 (+) |
| G820944 | NA | other | downstream | 1008893 | 55697640 ~ 55697978 (+) |
| G821363 | uhrf1bp1 | other | downstream | 1285295 | 55974042 ~ 55975316 (+) |
