Gene
RNA
| Item | Value |
|---|---|
| gene id | G820398 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 54754248 ~ 54754641 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU932916 | True | 394 | TUCP | 0.54 | 1 | 54754248 | 54754641 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| smim1 | NA | coding | downstream | 444205 | 54308615 ~ 54310043 (-) |
| cep104 | cep104 | coding | downstream | 459328 | 54247726 ~ 54294920 (-) |
| LOC110532394 | LOC106571994 | coding | downstream | 509726 | 54242412 ~ 54244522 (-) |
| LOC110533021 | NA | coding | downstream | 646987 | 54103925 ~ 54107261 (-) |
| LOC110531203 | NA | coding | downstream | 740704 | 54005547 ~ 54065096 (-) |
| chchd6a | chch6 | coding | upstream | 96221 | 54850862 ~ 54915395 (-) |
| LOC110532399 | LOC106566893 | coding | upstream | 163829 | 54918470 ~ 54921210 (-) |
| LOC110531207 | LOC106572365 | coding | upstream | 180819 | 54935460 ~ 55003862 (-) |
| LOC110532402 | vdr0 | coding | upstream | 280303 | 55024513 ~ 55114740 (-) |
| LOC110532403 | LOC106572364 | coding | upstream | 400736 | 55155377 ~ 55184333 (-) |
| G820397 | NA | non-coding | downstream | 441 | 54752948 ~ 54753807 (-) |
| G820396 | NA | non-coding | downstream | 1365 | 54752669 ~ 54752883 (-) |
| G820394 | NA | non-coding | downstream | 1991 | 54752042 ~ 54752257 (-) |
| G820386 | NA | non-coding | downstream | 15851 | 54738146 ~ 54738397 (-) |
| G820385 | NA | non-coding | downstream | 16191 | 54737772 ~ 54738057 (-) |
| G820399 | NA | non-coding | upstream | 776 | 54755417 ~ 54755664 (-) |
| G820400 | NA | non-coding | upstream | 1068 | 54755709 ~ 54755927 (-) |
| plxna1a | LOC106572368 | non-coding | upstream | 7168 | 54518209 ~ 54797805 (-) |
| G820484 | NA | non-coding | upstream | 119433 | 54874074 ~ 54876704 (-) |
| G820487 | NA | non-coding | upstream | 123553 | 54878194 ~ 54878690 (-) |
| G818117 | NA | other | downstream | 2022625 | 52727167 ~ 52731623 (-) |
| LOC110532367 | LOC106572017 | other | downstream | 2085528 | 52663417 ~ 52668762 (-) |
| G817848 | NA | other | downstream | 2600606 | 52153282 ~ 52153642 (-) |
| G820738 | NA | other | upstream | 554237 | 55308878 ~ 55309236 (-) |
| G820757 | NA | other | upstream | 564767 | 55319408 ~ 55320016 (-) |
| G821013 | LOC106572358 | other | upstream | 667902 | 55422543 ~ 55423559 (-) |
| G821851 | LOC106584099 | other | upstream | 1231319 | 55985960 ~ 55986517 (-) |
| LOC110532429 | NA | other | upstream | 1378363 | 56133004 ~ 56143428 (-) |
