Gene
RNA
| Item | Value |
|---|---|
| gene id | G819912 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 54757935 ~ 54758186 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU932395 | True | 252 | lncRNA | 0.51 | 1 | 54757935 | 54758186 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532395 | LOC106571990 | coding | upstream | 451762 | 54295022 ~ 54306173 (+) |
| LOC110532396 | LOC106571991 | coding | upstream | 510020 | 54245323 ~ 54249584 (+) |
| LOC110532392 | dffb | coding | upstream | 518429 | 54234796 ~ 54239506 (+) |
| LOC118966073 | NA | coding | upstream | 524488 | 54231749 ~ 54233447 (+) |
| LOC110532391 | LOC106571996 | coding | upstream | 1084437 | 53596083 ~ 53676213 (+) |
| twist3 | LOC106572367 | coding | downstream | 168542 | 54926728 ~ 54934570 (+) |
| LOC110532404 | LOC106572363 | coding | downstream | 434167 | 55192353 ~ 55207365 (+) |
| LOC110532406 | LOC106572360 | coding | downstream | 459420 | 55217606 ~ 55224372 (+) |
| LOC110532408 | ctbl1 | coding | downstream | 569926 | 55328112 ~ 55372587 (+) |
| LOC110532409 | LOC106572359 | coding | downstream | 616989 | 55375175 ~ 55410299 (+) |
| G819909 | NA | non-coding | upstream | 1799 | 54755928 ~ 54756136 (+) |
| G819908 | NA | non-coding | upstream | 3521 | 54754088 ~ 54754414 (+) |
| G819901 | NA | non-coding | upstream | 25374 | 54732244 ~ 54732561 (+) |
| G819894 | NA | non-coding | upstream | 36490 | 54720932 ~ 54721445 (+) |
| G819893 | NA | non-coding | upstream | 37104 | 54720627 ~ 54720831 (+) |
| G819913 | NA | non-coding | downstream | 875 | 54759061 ~ 54759296 (+) |
| G819914 | NA | non-coding | downstream | 1433 | 54759619 ~ 54759844 (+) |
| G819915 | LOC106572368 | non-coding | downstream | 2455 | 54760641 ~ 54761506 (+) |
| G819929 | NA | non-coding | downstream | 24951 | 54783137 ~ 54834710 (+) |
| G819930 | NA | non-coding | downstream | 77033 | 54835219 ~ 54835464 (+) |
| G819897 | NA | other | upstream | 30559 | 54726871 ~ 54727376 (+) |
| LOC110532368 | LOC106572016 | other | upstream | 2030415 | 52692676 ~ 52734929 (+) |
| LOC110532349 | LOC106591969 | other | upstream | 2432295 | 52323001 ~ 52325924 (+) |
| G815767 | casz1 | other | upstream | 3411441 | 51345372 ~ 51346494 (+) |
| G815610 | NA | other | upstream | 3678993 | 51078447 ~ 51078942 (+) |
| G820665 | NA | other | downstream | 475072 | 55233258 ~ 55233798 (+) |
| dlgap4a | dlgap4 | other | downstream | 772851 | 55531033 ~ 55647541 (+) |
| G820944 | NA | other | downstream | 939454 | 55697640 ~ 55697978 (+) |
| G821363 | uhrf1bp1 | other | downstream | 1215856 | 55974042 ~ 55975316 (+) |
| G821409 | pacsin1 | other | downstream | 1303520 | 56061706 ~ 56063655 (+) |
