G820110


Basic Information

Item Value
gene id G820110
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 55051453 ~ 55051664 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU932609
tgaagaatcacaaatataatttatttcaatttaacacttttttttggttacaacatgattccatgtgtcttatttcatagtttatgtcttcactattattcaacaatgcagaaaatagtcaaaataaagaaaaacacttgaatgagtaggtgtctaaacttttgactggtactgtatatattttttttaatgggaCACAAGACACCCGTCTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU932609 True 212 lncRNA 0.28 1 55051453 55051664

Neighbor

gene id symbol gene type direction distance location
twist3 LOC106572367 coding upstream 116883 54926728 ~ 54934570 (+)
LOC110532395 LOC106571990 coding upstream 745280 54295022 ~ 54306173 (+)
LOC110532396 LOC106571991 coding upstream 803538 54245323 ~ 54249584 (+)
LOC110532392 dffb coding upstream 811947 54234796 ~ 54239506 (+)
LOC118966073 NA coding upstream 818006 54231749 ~ 54233447 (+)
LOC110532404 LOC106572363 coding downstream 140689 55192353 ~ 55207365 (+)
LOC110532406 LOC106572360 coding downstream 165942 55217606 ~ 55224372 (+)
LOC110532408 ctbl1 coding downstream 276448 55328112 ~ 55372587 (+)
LOC110532409 LOC106572359 coding downstream 323511 55375175 ~ 55410299 (+)
LOC110532410 LOC106572358 coding downstream 367659 55419323 ~ 55425566 (+)
G820042 NA non-coding upstream 101711 54949065 ~ 54949742 (+)
G819970 NA non-coding upstream 211106 54839934 ~ 54840347 (+)
G819930 NA non-coding upstream 215989 54835219 ~ 54835464 (+)
G819929 NA non-coding upstream 216743 54783137 ~ 54834710 (+)
G819915 LOC106572368 non-coding upstream 289947 54760641 ~ 54761506 (+)
G820114 NA non-coding downstream 2569 55054233 ~ 55054479 (+)
G820121 NA non-coding downstream 9059 55060723 ~ 55060941 (+)
G820129 NA non-coding downstream 19202 55070866 ~ 55071083 (+)
G820133 NA non-coding downstream 22498 55074162 ~ 55074375 (+)
G820162 NA non-coding downstream 54428 55106092 ~ 55106470 (+)
G819897 NA other upstream 324077 54726871 ~ 54727376 (+)
LOC110532368 LOC106572016 other upstream 2323933 52692676 ~ 52734929 (+)
LOC110532349 LOC106591969 other upstream 2725813 52323001 ~ 52325924 (+)
G815767 casz1 other upstream 3704959 51345372 ~ 51346494 (+)
G815610 NA other upstream 3972511 51078447 ~ 51078942 (+)
G820665 NA other downstream 181594 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 479373 55531033 ~ 55647541 (+)
G820944 NA other downstream 645976 55697640 ~ 55697978 (+)
G821363 uhrf1bp1 other downstream 922378 55974042 ~ 55975316 (+)
G821409 pacsin1 other downstream 1010042 56061706 ~ 56063655 (+)

Expression


Co-expression Network