G820121


Basic Information

Item Value
gene id G820121
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 55060723 ~ 55060941 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU932620
ggcctatatgatgtAGTCTTTAGCCAGCATGAGCCTAGCACTTAAAGTGCTGAAGTTACTGTATTTATGACCATTTAGCAATCAGTCTCTGAGCACTCACACTCCTTCATCATGCCGATGTCCACGCAGCGTTTGAGCCGGCAGGCCTGGCAGTGCCGTCGGTTGTCCTTGGTGATGGTGCAGCTGCCGTTGAAGGGGCAGGTGAAACTGGCCTTACGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU932620 True 219 lncRNA 0.53 1 55060723 55060941

Neighbor

gene id symbol gene type direction distance location
twist3 LOC106572367 coding upstream 126153 54926728 ~ 54934570 (+)
LOC110532395 LOC106571990 coding upstream 754550 54295022 ~ 54306173 (+)
LOC110532396 LOC106571991 coding upstream 812808 54245323 ~ 54249584 (+)
LOC110532392 dffb coding upstream 821217 54234796 ~ 54239506 (+)
LOC118966073 NA coding upstream 827276 54231749 ~ 54233447 (+)
LOC110532404 LOC106572363 coding downstream 131412 55192353 ~ 55207365 (+)
LOC110532406 LOC106572360 coding downstream 156665 55217606 ~ 55224372 (+)
LOC110532408 ctbl1 coding downstream 267171 55328112 ~ 55372587 (+)
LOC110532409 LOC106572359 coding downstream 314234 55375175 ~ 55410299 (+)
LOC110532410 LOC106572358 coding downstream 358382 55419323 ~ 55425566 (+)
G820114 NA non-coding upstream 6244 55054233 ~ 55054479 (+)
G820110 NA non-coding upstream 9059 55051453 ~ 55051664 (+)
G820042 NA non-coding upstream 110981 54949065 ~ 54949742 (+)
G819970 NA non-coding upstream 220376 54839934 ~ 54840347 (+)
G819930 NA non-coding upstream 225259 54835219 ~ 54835464 (+)
G820129 NA non-coding downstream 9925 55070866 ~ 55071083 (+)
G820133 NA non-coding downstream 13221 55074162 ~ 55074375 (+)
G820162 NA non-coding downstream 45151 55106092 ~ 55106470 (+)
G820164 NA non-coding downstream 46748 55107689 ~ 55108086 (+)
G820163 NA non-coding downstream 47895 55108836 ~ 55110199 (+)
G819897 NA other upstream 333347 54726871 ~ 54727376 (+)
LOC110532368 LOC106572016 other upstream 2333203 52692676 ~ 52734929 (+)
LOC110532349 LOC106591969 other upstream 2735083 52323001 ~ 52325924 (+)
G815767 casz1 other upstream 3714229 51345372 ~ 51346494 (+)
G815610 NA other upstream 3981781 51078447 ~ 51078942 (+)
G820665 NA other downstream 172317 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 470096 55531033 ~ 55647541 (+)
G820944 NA other downstream 636699 55697640 ~ 55697978 (+)
G821363 uhrf1bp1 other downstream 913101 55974042 ~ 55975316 (+)
G821409 pacsin1 other downstream 1000765 56061706 ~ 56063655 (+)

Expression


Co-expression Network