Gene
RNA
| Item | Value |
|---|---|
| gene id | G820164 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 55107689 ~ 55108086 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU932663 | True | 398 | lncRNA | 0.40 | 1 | 55107689 | 55108086 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| twist3 | LOC106572367 | coding | upstream | 173119 | 54926728 ~ 54934570 (+) |
| LOC110532395 | LOC106571990 | coding | upstream | 801516 | 54295022 ~ 54306173 (+) |
| LOC110532396 | LOC106571991 | coding | upstream | 859774 | 54245323 ~ 54249584 (+) |
| LOC110532392 | dffb | coding | upstream | 868183 | 54234796 ~ 54239506 (+) |
| LOC118966073 | NA | coding | upstream | 874242 | 54231749 ~ 54233447 (+) |
| LOC110532404 | LOC106572363 | coding | downstream | 84267 | 55192353 ~ 55207365 (+) |
| LOC110532406 | LOC106572360 | coding | downstream | 109520 | 55217606 ~ 55224372 (+) |
| LOC110532408 | ctbl1 | coding | downstream | 220026 | 55328112 ~ 55372587 (+) |
| LOC110532409 | LOC106572359 | coding | downstream | 267089 | 55375175 ~ 55410299 (+) |
| LOC110532410 | LOC106572358 | coding | downstream | 311237 | 55419323 ~ 55425566 (+) |
| G820162 | NA | non-coding | upstream | 1219 | 55106092 ~ 55106470 (+) |
| G820133 | NA | non-coding | upstream | 33314 | 55074162 ~ 55074375 (+) |
| G820129 | NA | non-coding | upstream | 36606 | 55070866 ~ 55071083 (+) |
| G820121 | NA | non-coding | upstream | 46748 | 55060723 ~ 55060941 (+) |
| G820114 | NA | non-coding | upstream | 53210 | 55054233 ~ 55054479 (+) |
| G820163 | NA | non-coding | downstream | 750 | 55108836 ~ 55110199 (+) |
| G820176 | NA | non-coding | downstream | 19064 | 55127150 ~ 55149280 (+) |
| G820174 | LOC106572364 | non-coding | downstream | 47321 | 55155407 ~ 55156727 (+) |
| G820175 | LOC106572364 | non-coding | downstream | 49005 | 55157091 ~ 55158268 (+) |
| G820211 | NA | non-coding | downstream | 76518 | 55184604 ~ 55184824 (+) |
| G819897 | NA | other | upstream | 380313 | 54726871 ~ 54727376 (+) |
| LOC110532368 | LOC106572016 | other | upstream | 2380169 | 52692676 ~ 52734929 (+) |
| LOC110532349 | LOC106591969 | other | upstream | 2782049 | 52323001 ~ 52325924 (+) |
| G815767 | casz1 | other | upstream | 3761195 | 51345372 ~ 51346494 (+) |
| G815610 | NA | other | upstream | 4028747 | 51078447 ~ 51078942 (+) |
| G820665 | NA | other | downstream | 125172 | 55233258 ~ 55233798 (+) |
| dlgap4a | dlgap4 | other | downstream | 422951 | 55531033 ~ 55647541 (+) |
| G820944 | NA | other | downstream | 589554 | 55697640 ~ 55697978 (+) |
| G821363 | uhrf1bp1 | other | downstream | 865956 | 55974042 ~ 55975316 (+) |
| G821409 | pacsin1 | other | downstream | 953620 | 56061706 ~ 56063655 (+) |
