G820742


Basic Information

Item Value
gene id G820742
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 55313040 ~ 55313418 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU933286
ctagtacttttgggtgtcagggaaaatgtatggagtaaaaagtactgtaacggtcttcttggtgagaaggagagtcggaccaaaatgcagcatgtagattgcgatccatgttttaatgaacaaacgtaaaacacgaatcaatgcaaacactacaaaaataaagaacgtgatgaacgtaacgaaaacctaaaacagcctatctggtgaaaaacacatagacaggaacaatcacccacaaacacacagtgaaacccaggctacctaaatatggttcccaatcagagacaatgacgaacacctgcctctgactgagaaccatatcaggctgaacatagaaatagacaaacaagacatgaaacatagaatgcccactcagatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU933286 True 379 lncRNA 0.40 1 55313040 55313418

Neighbor

gene id symbol gene type direction distance location
LOC110532406 LOC106572360 coding upstream 88668 55217606 ~ 55224372 (+)
LOC110532404 LOC106572363 coding upstream 105675 55192353 ~ 55207365 (+)
twist3 LOC106572367 coding upstream 378470 54926728 ~ 54934570 (+)
LOC110532395 LOC106571990 coding upstream 1006867 54295022 ~ 54306173 (+)
LOC110532396 LOC106571991 coding upstream 1065125 54245323 ~ 54249584 (+)
LOC110532408 ctbl1 coding downstream 14694 55328112 ~ 55372587 (+)
LOC110532409 LOC106572359 coding downstream 61757 55375175 ~ 55410299 (+)
LOC110532410 LOC106572358 coding downstream 105905 55419323 ~ 55425566 (+)
LOC110533022 LOC106611372 coding downstream 159322 55472740 ~ 55482782 (+)
dlgap4a dlgap4 coding downstream 217615 55531033 ~ 55647541 (+)
G820734 NA non-coding upstream 5086 55307714 ~ 55307954 (+)
G820717 NA non-coding upstream 13880 55298776 ~ 55299160 (+)
G820673 NA non-coding upstream 52238 55260361 ~ 55260802 (+)
G820655 NA non-coding upstream 91158 55221579 ~ 55221882 (+)
G820760 NA non-coding downstream 7030 55320448 ~ 55321476 (+)
G820769 NA non-coding downstream 11414 55324832 ~ 55325052 (+)
G820771 NA non-coding downstream 12796 55326214 ~ 55326426 (+)
G820831 NA non-coding downstream 143161 55456579 ~ 55456870 (+)
G820837 NA non-coding downstream 152545 55465963 ~ 55466765 (+)
G820665 NA other upstream 79242 55233258 ~ 55233798 (+)
G819897 NA other upstream 585664 54726871 ~ 54727376 (+)
LOC110532368 LOC106572016 other upstream 2585520 52692676 ~ 52734929 (+)
LOC110532349 LOC106591969 other upstream 2987400 52323001 ~ 52325924 (+)
G815767 casz1 other upstream 3966546 51345372 ~ 51346494 (+)
G820944 NA other downstream 384222 55697640 ~ 55697978 (+)
G821363 uhrf1bp1 other downstream 660624 55974042 ~ 55975316 (+)
G821409 pacsin1 other downstream 748288 56061706 ~ 56063655 (+)
LOC110532426 NA other downstream 805701 56119005 ~ 56124213 (+)

Expression


Co-expression Network