Gene
RNA
| Item | Value |
|---|---|
| gene id | G820760 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 55320448 ~ 55321476 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU933304 | True | 1029 | lncRNA | 0.39 | 1 | 55320448 | 55321476 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532406 | LOC106572360 | coding | upstream | 96076 | 55217606 ~ 55224372 (+) |
| LOC110532404 | LOC106572363 | coding | upstream | 113083 | 55192353 ~ 55207365 (+) |
| twist3 | LOC106572367 | coding | upstream | 385878 | 54926728 ~ 54934570 (+) |
| LOC110532395 | LOC106571990 | coding | upstream | 1014275 | 54295022 ~ 54306173 (+) |
| LOC110532396 | LOC106571991 | coding | upstream | 1072533 | 54245323 ~ 54249584 (+) |
| LOC110532408 | ctbl1 | coding | downstream | 6636 | 55328112 ~ 55372587 (+) |
| LOC110532409 | LOC106572359 | coding | downstream | 53699 | 55375175 ~ 55410299 (+) |
| LOC110532410 | LOC106572358 | coding | downstream | 97847 | 55419323 ~ 55425566 (+) |
| LOC110533022 | LOC106611372 | coding | downstream | 151264 | 55472740 ~ 55482782 (+) |
| dlgap4a | dlgap4 | coding | downstream | 209557 | 55531033 ~ 55647541 (+) |
| G820742 | NA | non-coding | upstream | 7030 | 55313040 ~ 55313418 (+) |
| G820734 | NA | non-coding | upstream | 12494 | 55307714 ~ 55307954 (+) |
| G820717 | NA | non-coding | upstream | 21288 | 55298776 ~ 55299160 (+) |
| G820673 | NA | non-coding | upstream | 59646 | 55260361 ~ 55260802 (+) |
| G820769 | NA | non-coding | downstream | 3356 | 55324832 ~ 55325052 (+) |
| G820771 | NA | non-coding | downstream | 4738 | 55326214 ~ 55326426 (+) |
| G820831 | NA | non-coding | downstream | 135103 | 55456579 ~ 55456870 (+) |
| G820837 | NA | non-coding | downstream | 144487 | 55465963 ~ 55466765 (+) |
| G820838 | NA | non-coding | downstream | 146223 | 55467699 ~ 55467901 (+) |
| G820665 | NA | other | upstream | 86650 | 55233258 ~ 55233798 (+) |
| G819897 | NA | other | upstream | 593072 | 54726871 ~ 54727376 (+) |
| LOC110532368 | LOC106572016 | other | upstream | 2592928 | 52692676 ~ 52734929 (+) |
| LOC110532349 | LOC106591969 | other | upstream | 2994808 | 52323001 ~ 52325924 (+) |
| G815767 | casz1 | other | upstream | 3973954 | 51345372 ~ 51346494 (+) |
| G820944 | NA | other | downstream | 376164 | 55697640 ~ 55697978 (+) |
| G821363 | uhrf1bp1 | other | downstream | 652566 | 55974042 ~ 55975316 (+) |
| G821409 | pacsin1 | other | downstream | 740230 | 56061706 ~ 56063655 (+) |
| LOC110532426 | NA | other | downstream | 797643 | 56119005 ~ 56124213 (+) |
