G820769


Basic Information

Item Value
gene id G820769
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 55324832 ~ 55325052 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU933313
TTTTGGGGTGGTGGCTGGGATGAACAGTTCAAAAGAAGACATTATGTCCTGCACATGAGTAATCGCCATCCGCGTTGACCCTGGTTGTatccttatcacattggcagccatgcgGGGTGGCTCATTCCTTCAGCAAGAAGACCATtacatttcattatttttttttttacatccatatTTCTCCTCCTGCAGGCTACTGATGAGCAAGCTgttgacgggct

Function

NR:

description
PREDICTED: piggyBac transposable element-derived protein 4-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU933313 True 221 lncRNA 0.46 1 55324832 55325052

Neighbor

gene id symbol gene type direction distance location
LOC110532406 LOC106572360 coding upstream 100460 55217606 ~ 55224372 (+)
LOC110532404 LOC106572363 coding upstream 117467 55192353 ~ 55207365 (+)
twist3 LOC106572367 coding upstream 390262 54926728 ~ 54934570 (+)
LOC110532395 LOC106571990 coding upstream 1018659 54295022 ~ 54306173 (+)
LOC110532396 LOC106571991 coding upstream 1076917 54245323 ~ 54249584 (+)
LOC110532408 ctbl1 coding downstream 3060 55328112 ~ 55372587 (+)
LOC110532409 LOC106572359 coding downstream 50123 55375175 ~ 55410299 (+)
LOC110532410 LOC106572358 coding downstream 94271 55419323 ~ 55425566 (+)
LOC110533022 LOC106611372 coding downstream 147688 55472740 ~ 55482782 (+)
dlgap4a dlgap4 coding downstream 205981 55531033 ~ 55647541 (+)
G820760 NA non-coding upstream 3356 55320448 ~ 55321476 (+)
G820742 NA non-coding upstream 11414 55313040 ~ 55313418 (+)
G820734 NA non-coding upstream 16878 55307714 ~ 55307954 (+)
G820717 NA non-coding upstream 25672 55298776 ~ 55299160 (+)
G820673 NA non-coding upstream 64030 55260361 ~ 55260802 (+)
G820771 NA non-coding downstream 1162 55326214 ~ 55326426 (+)
G820831 NA non-coding downstream 131527 55456579 ~ 55456870 (+)
G820837 NA non-coding downstream 140911 55465963 ~ 55466765 (+)
G820838 NA non-coding downstream 142647 55467699 ~ 55467901 (+)
G820665 NA other upstream 91034 55233258 ~ 55233798 (+)
G819897 NA other upstream 597456 54726871 ~ 54727376 (+)
LOC110532368 LOC106572016 other upstream 2597312 52692676 ~ 52734929 (+)
LOC110532349 LOC106591969 other upstream 2999192 52323001 ~ 52325924 (+)
G815767 casz1 other upstream 3978338 51345372 ~ 51346494 (+)
G820944 NA other downstream 372588 55697640 ~ 55697978 (+)
G821363 uhrf1bp1 other downstream 648990 55974042 ~ 55975316 (+)
G821409 pacsin1 other downstream 736654 56061706 ~ 56063655 (+)
LOC110532426 NA other downstream 794067 56119005 ~ 56124213 (+)

Expression


Co-expression Network