Gene
RNA
| Item | Value |
|---|---|
| gene id | G820838 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 55467699 ~ 55467901 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU933387 | True | 203 | lncRNA | 0.39 | 1 | 55467699 | 55467901 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532410 | LOC106572358 | coding | upstream | 42133 | 55419323 ~ 55425566 (+) |
| LOC110532409 | LOC106572359 | coding | upstream | 57400 | 55375175 ~ 55410299 (+) |
| LOC110532408 | ctbl1 | coding | upstream | 95112 | 55328112 ~ 55372587 (+) |
| LOC110532406 | LOC106572360 | coding | upstream | 243327 | 55217606 ~ 55224372 (+) |
| LOC110532404 | LOC106572363 | coding | upstream | 260334 | 55192353 ~ 55207365 (+) |
| LOC110533022 | LOC106611372 | coding | downstream | 4839 | 55472740 ~ 55482782 (+) |
| dlgap4a | dlgap4 | coding | downstream | 63132 | 55531033 ~ 55647541 (+) |
| LOC110532413 | LOC106572354 | coding | downstream | 180868 | 55648769 ~ 55683707 (+) |
| LOC110532415 | LOC106572353 | coding | downstream | 217353 | 55685254 ~ 55691748 (+) |
| LOC110532416 | scube3 | coding | downstream | 235684 | 55703585 ~ 55827053 (+) |
| G820837 | NA | non-coding | upstream | 934 | 55465963 ~ 55466765 (+) |
| G820831 | NA | non-coding | upstream | 10829 | 55456579 ~ 55456870 (+) |
| G820771 | NA | non-coding | upstream | 141273 | 55326214 ~ 55326426 (+) |
| G820769 | NA | non-coding | upstream | 142647 | 55324832 ~ 55325052 (+) |
| G820760 | NA | non-coding | upstream | 146223 | 55320448 ~ 55321476 (+) |
| G820937 | NA | non-coding | downstream | 149426 | 55617327 ~ 55617607 (+) |
| G821275 | LOC106583515 | non-coding | downstream | 369522 | 55837423 ~ 55844030 (+) |
| G821250 | NA | non-coding | downstream | 381721 | 55849622 ~ 55853214 (+) |
| G820665 | NA | other | upstream | 233901 | 55233258 ~ 55233798 (+) |
| G819897 | NA | other | upstream | 740323 | 54726871 ~ 54727376 (+) |
| LOC110532368 | LOC106572016 | other | upstream | 2740179 | 52692676 ~ 52734929 (+) |
| LOC110532349 | LOC106591969 | other | upstream | 3142059 | 52323001 ~ 52325924 (+) |
| G815767 | casz1 | other | upstream | 4121205 | 51345372 ~ 51346494 (+) |
| G820944 | NA | other | downstream | 229739 | 55697640 ~ 55697978 (+) |
| G821363 | uhrf1bp1 | other | downstream | 506141 | 55974042 ~ 55975316 (+) |
| G821409 | pacsin1 | other | downstream | 593805 | 56061706 ~ 56063655 (+) |
| LOC110532426 | NA | other | downstream | 651218 | 56119005 ~ 56124213 (+) |
