Gene
RNA
| Item | Value |
|---|---|
| gene id | G820937 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 55617327 ~ 55617607 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU933488 | True | 281 | lncRNA | 0.38 | 1 | 55617327 | 55617607 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533022 | LOC106611372 | coding | upstream | 134551 | 55472740 ~ 55482782 (+) |
| LOC110532410 | LOC106572358 | coding | upstream | 191761 | 55419323 ~ 55425566 (+) |
| LOC110532409 | LOC106572359 | coding | upstream | 207028 | 55375175 ~ 55410299 (+) |
| LOC110532408 | ctbl1 | coding | upstream | 244740 | 55328112 ~ 55372587 (+) |
| LOC110532406 | LOC106572360 | coding | upstream | 392955 | 55217606 ~ 55224372 (+) |
| LOC110532413 | LOC106572354 | coding | downstream | 31162 | 55648769 ~ 55683707 (+) |
| LOC110532415 | LOC106572353 | coding | downstream | 67647 | 55685254 ~ 55691748 (+) |
| LOC110532416 | scube3 | coding | downstream | 85978 | 55703585 ~ 55827053 (+) |
| LOC110531209 | NA | coding | downstream | 209824 | 55827431 ~ 55829584 (+) |
| taf11 | taf11 | coding | downstream | 340354 | 55957961 ~ 55959870 (+) |
| dlgap4a | dlgap4 | non-coding | upstream | 1179 | 55531033 ~ 55647541 (+) |
| G820838 | NA | non-coding | upstream | 149426 | 55467699 ~ 55467901 (+) |
| G820837 | NA | non-coding | upstream | 150562 | 55465963 ~ 55466765 (+) |
| G820831 | NA | non-coding | upstream | 160457 | 55456579 ~ 55456870 (+) |
| G821275 | LOC106583515 | non-coding | downstream | 219816 | 55837423 ~ 55844030 (+) |
| G821250 | NA | non-coding | downstream | 232015 | 55849622 ~ 55853214 (+) |
| G821355 | NA | non-coding | downstream | 339761 | 55957368 ~ 55957642 (+) |
| G821356 | NA | non-coding | downstream | 346355 | 55963962 ~ 55964172 (+) |
| G821357 | uhrf1bp1 | non-coding | downstream | 346649 | 55964256 ~ 55966429 (+) |
| G820665 | NA | other | upstream | 383529 | 55233258 ~ 55233798 (+) |
| G819897 | NA | other | upstream | 889951 | 54726871 ~ 54727376 (+) |
| LOC110532368 | LOC106572016 | other | upstream | 2889807 | 52692676 ~ 52734929 (+) |
| LOC110532349 | LOC106591969 | other | upstream | 3291687 | 52323001 ~ 52325924 (+) |
| G820944 | NA | other | downstream | 80033 | 55697640 ~ 55697978 (+) |
| G821363 | uhrf1bp1 | other | downstream | 356435 | 55974042 ~ 55975316 (+) |
| G821409 | pacsin1 | other | downstream | 444099 | 56061706 ~ 56063655 (+) |
| LOC110532426 | NA | other | downstream | 501512 | 56119005 ~ 56124213 (+) |
| LOC110532427 | LOC106572343 | other | downstream | 508854 | 56125754 ~ 56132936 (+) |
