Gene
RNA
| Item | Value |
|---|---|
| gene id | G821355 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 55957368 ~ 55957642 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU933954 | True | 275 | lncRNA | 0.42 | 1 | 55957368 | 55957642 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531209 | NA | coding | upstream | 127784 | 55827431 ~ 55829584 (+) |
| LOC110532416 | scube3 | coding | upstream | 130315 | 55703585 ~ 55827053 (+) |
| LOC110532415 | LOC106572353 | coding | upstream | 265620 | 55685254 ~ 55691748 (+) |
| LOC110532413 | LOC106572354 | coding | upstream | 273661 | 55648769 ~ 55683707 (+) |
| dlgap4a | dlgap4 | coding | upstream | 309827 | 55531033 ~ 55647541 (+) |
| taf11 | taf11 | coding | downstream | 319 | 55957961 ~ 55959870 (+) |
| LOC110532421 | cssa15h6orf106 | coding | downstream | 70895 | 56028537 ~ 56035153 (+) |
| LOC110532424 | spdef | coding | downstream | 85190 | 56042832 ~ 56051988 (+) |
| LOC110532428 | NA | coding | downstream | 145923 | 56103492 ~ 56112044 (+) |
| LOC110532426 | NA | coding | downstream | 161363 | 56119005 ~ 56124213 (+) |
| G821250 | NA | non-coding | upstream | 104154 | 55849622 ~ 55853214 (+) |
| G821275 | LOC106583515 | non-coding | upstream | 113338 | 55837423 ~ 55844030 (+) |
| G820937 | NA | non-coding | upstream | 339761 | 55617327 ~ 55617607 (+) |
| LOC110533022 | LOC106611372 | non-coding | upstream | 474586 | 55472740 ~ 55482782 (+) |
| G821356 | NA | non-coding | downstream | 6320 | 55963962 ~ 55964172 (+) |
| G821357 | uhrf1bp1 | non-coding | downstream | 6614 | 55964256 ~ 55966429 (+) |
| G821364 | NA | non-coding | downstream | 17885 | 55975527 ~ 55975898 (+) |
| G821369 | NA | non-coding | downstream | 23270 | 55980912 ~ 55981198 (+) |
| G821371 | NA | non-coding | downstream | 27475 | 55985117 ~ 55985321 (+) |
| G820944 | NA | other | upstream | 259390 | 55697640 ~ 55697978 (+) |
| G820665 | NA | other | upstream | 723570 | 55233258 ~ 55233798 (+) |
| G819897 | NA | other | upstream | 1229992 | 54726871 ~ 54727376 (+) |
| LOC110532368 | LOC106572016 | other | upstream | 3229848 | 52692676 ~ 52734929 (+) |
| G821363 | uhrf1bp1 | other | downstream | 16400 | 55974042 ~ 55975316 (+) |
| G821409 | pacsin1 | other | downstream | 104064 | 56061706 ~ 56063655 (+) |
| LOC110532427 | LOC106572343 | other | downstream | 168819 | 56125754 ~ 56132936 (+) |
| G822283 | NA | other | downstream | 614965 | 56572607 ~ 56572957 (+) |
