G821357 (uhrf1bp1)


Basic Information

Item Value
gene id G821357
gene name uhrf1bp1
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 55964256 ~ 55966429 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU933956
ATGGTGATATTGTCCAGGCGGATCTTCATGGGCTGGACATCAGCACTGAGCTCATCCTCCAGGAAGGGCCCCAGGGTAGCCAGGGTGGAGGCCAGGAGCTCCGCCCGACAGCCCTGCACACTCAGCTCCAGGTGACCTACCAACGCAGAGAGGGGACCGTGCCGTGCTGCAGAGGGACCCATCTCTATTCGCATGCCCACCACTGGAGCTGACCTGCagccctgtctctgtcccagggtgGACCCACCTGGAGATTAGGACATCAAGGAAAGCGTCAGAGACCCTTACGTTGCCCATCTGTCTGGAGGTGAGATGCTGGACCTCCACTGCCACCACCAGGTCCTCTCCCTTCAGGTCCGCCACACAGGCAATACCACTGAGCACCAGCAACAACACAGAGGCctgcacagcacagtacaggacAAGTAGTTACCCACAATAAGAATTATGCATTACCTAACTTACAAGTACAGTATGATTCCCGACCATCCCTCCATTGCATATACAGTGAGAGTGCTGACTAGGTCTGTGGCGGTCCTTAAATTTAGTCAGCCAGTGATTATCATGCAAATAACTGCTGGTgttaattgaccgttaattaacataaacatgtttatcatctcctggcttccacacaagccactgatgcagaccgttggaacatttacattttaaaaaaagtcTAATCTATTTAACAAAtccatcacaataaatcaattatttattttagac

Function

symbol description
uhrf1bp1 Orthologous to human UHRF1BP1 (UHRF1 binding protein 1).

NR:

description
UHRF1-binding protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU933956 True 732 lncRNA 0.50 2 55964256 55966429

Neighbor

gene id symbol gene type direction distance location
taf11 taf11 coding upstream 4386 55957961 ~ 55959870 (+)
LOC110531209 NA coding upstream 134672 55827431 ~ 55829584 (+)
LOC110532416 scube3 coding upstream 137203 55703585 ~ 55827053 (+)
LOC110532415 LOC106572353 coding upstream 272508 55685254 ~ 55691748 (+)
LOC110532413 LOC106572354 coding upstream 280549 55648769 ~ 55683707 (+)
LOC110532421 cssa15h6orf106 coding downstream 62108 56028537 ~ 56035153 (+)
LOC110532424 spdef coding downstream 76403 56042832 ~ 56051988 (+)
LOC110532428 NA coding downstream 137136 56103492 ~ 56112044 (+)
LOC110532426 NA coding downstream 152576 56119005 ~ 56124213 (+)
LOC110532427 LOC106572343 coding downstream 159325 56125754 ~ 56132936 (+)
G821356 NA non-coding upstream 84 55963962 ~ 55964172 (+)
G821355 NA non-coding upstream 6614 55957368 ~ 55957642 (+)
G821250 NA non-coding upstream 111042 55849622 ~ 55853214 (+)
G821275 LOC106583515 non-coding upstream 120226 55837423 ~ 55844030 (+)
G820937 NA non-coding upstream 346649 55617327 ~ 55617607 (+)
G821364 NA non-coding downstream 9098 55975527 ~ 55975898 (+)
G821369 NA non-coding downstream 14483 55980912 ~ 55981198 (+)
G821371 NA non-coding downstream 18688 55985117 ~ 55985321 (+)
G821377 NA non-coding downstream 30087 55996516 ~ 55996738 (+)
G821380 NA non-coding downstream 32540 55998969 ~ 56027777 (+)
G820944 NA other upstream 266278 55697640 ~ 55697978 (+)
dlgap4a dlgap4 other upstream 348855 55531033 ~ 55647541 (+)
G820665 NA other upstream 730458 55233258 ~ 55233798 (+)
G819897 NA other upstream 1236880 54726871 ~ 54727376 (+)
LOC110532368 LOC106572016 other upstream 3236736 52692676 ~ 52734929 (+)
G821363 uhrf1bp1 other downstream 7613 55974042 ~ 55975316 (+)
G821409 pacsin1 other downstream 95277 56061706 ~ 56063655 (+)
G822283 NA other downstream 606178 56572607 ~ 56572957 (+)

Expression


Co-expression Network