G821377


Basic Information

Item Value
gene id G821377
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 55996516 ~ 55996738 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU933979
tactgtactaaCCGCTACATAaaacctaattttgtgggcatacctctcctctcttgggGTCTGTGATGCGGGTGTAGCGGAGGTCAGTCTTCTGCCATTTGGGGTTGAGACTGTTAccctggagctgccagagctcGAAGGAGGCGCGAAAGGCACGGGACTGCACCTTGATGGTGATGGAGTTGATGATGACAGACATACCCTCCACCACCTTCTCAGCGAA

Function

NR:

description
UHRF1-binding protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU933979 True 223 lncRNA 0.53 1 55996516 55996738

Neighbor

gene id symbol gene type direction distance location
taf11 taf11 coding upstream 36646 55957961 ~ 55959870 (+)
LOC110531209 NA coding upstream 166932 55827431 ~ 55829584 (+)
LOC110532416 scube3 coding upstream 169463 55703585 ~ 55827053 (+)
LOC110532415 LOC106572353 coding upstream 304768 55685254 ~ 55691748 (+)
LOC110532413 LOC106572354 coding upstream 312809 55648769 ~ 55683707 (+)
LOC110532421 cssa15h6orf106 coding downstream 31799 56028537 ~ 56035153 (+)
LOC110532424 spdef coding downstream 46094 56042832 ~ 56051988 (+)
LOC110532428 NA coding downstream 106827 56103492 ~ 56112044 (+)
LOC110532426 NA coding downstream 122267 56119005 ~ 56124213 (+)
LOC110532427 LOC106572343 coding downstream 129016 56125754 ~ 56132936 (+)
G821371 NA non-coding upstream 11195 55985117 ~ 55985321 (+)
G821369 NA non-coding upstream 15318 55980912 ~ 55981198 (+)
G821364 NA non-coding upstream 20618 55975527 ~ 55975898 (+)
G821357 uhrf1bp1 non-coding upstream 30087 55964256 ~ 55966429 (+)
G821356 NA non-coding upstream 32344 55963962 ~ 55964172 (+)
G821380 NA non-coding downstream 2231 55998969 ~ 56027777 (+)
G821393 NA non-coding downstream 21886 56018624 ~ 56019571 (+)
G821408 pacsin1 non-coding downstream 55465 56052203 ~ 56055971 (+)
G821433 NA non-coding downstream 90865 56087603 ~ 56088983 (+)
G821363 uhrf1bp1 other upstream 21200 55974042 ~ 55975316 (+)
G820944 NA other upstream 298538 55697640 ~ 55697978 (+)
dlgap4a dlgap4 other upstream 381115 55531033 ~ 55647541 (+)
G820665 NA other upstream 762718 55233258 ~ 55233798 (+)
G819897 NA other upstream 1269140 54726871 ~ 54727376 (+)
G821409 pacsin1 other downstream 64968 56061706 ~ 56063655 (+)
G822283 NA other downstream 575869 56572607 ~ 56572957 (+)
G822404 NA other downstream 765887 56762625 ~ 56763540 (+)

Expression


Co-expression Network