Gene
RNA
| Item | Value |
|---|---|
| gene id | G821380 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 55998969 ~ 56027777 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: UHRF1-binding protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU933983 | True | 288 | lncRNA | 0.55 | 2 | 55998969 | 56027777 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| taf11 | taf11 | coding | upstream | 39099 | 55957961 ~ 55959870 (+) |
| LOC110531209 | NA | coding | upstream | 169385 | 55827431 ~ 55829584 (+) |
| LOC110532416 | scube3 | coding | upstream | 171916 | 55703585 ~ 55827053 (+) |
| LOC110532415 | LOC106572353 | coding | upstream | 307221 | 55685254 ~ 55691748 (+) |
| LOC110532413 | LOC106572354 | coding | upstream | 315262 | 55648769 ~ 55683707 (+) |
| LOC110532421 | cssa15h6orf106 | coding | downstream | 760 | 56028537 ~ 56035153 (+) |
| LOC110532424 | spdef | coding | downstream | 15055 | 56042832 ~ 56051988 (+) |
| LOC110532428 | NA | coding | downstream | 75788 | 56103492 ~ 56112044 (+) |
| LOC110532426 | NA | coding | downstream | 91228 | 56119005 ~ 56124213 (+) |
| LOC110532427 | LOC106572343 | coding | downstream | 97977 | 56125754 ~ 56132936 (+) |
| G821377 | NA | non-coding | upstream | 2231 | 55996516 ~ 55996738 (+) |
| G821371 | NA | non-coding | upstream | 13648 | 55985117 ~ 55985321 (+) |
| G821369 | NA | non-coding | upstream | 17771 | 55980912 ~ 55981198 (+) |
| G821364 | NA | non-coding | upstream | 23071 | 55975527 ~ 55975898 (+) |
| G821357 | uhrf1bp1 | non-coding | upstream | 32540 | 55964256 ~ 55966429 (+) |
| G821408 | pacsin1 | non-coding | downstream | 24426 | 56052203 ~ 56055971 (+) |
| G821433 | NA | non-coding | downstream | 59826 | 56087603 ~ 56088983 (+) |
| G821459 | NA | non-coding | downstream | 117039 | 56144816 ~ 56145130 (+) |
| G821464 | NA | non-coding | downstream | 123409 | 56151186 ~ 56151527 (+) |
| G821363 | uhrf1bp1 | other | upstream | 23653 | 55974042 ~ 55975316 (+) |
| G820944 | NA | other | upstream | 300991 | 55697640 ~ 55697978 (+) |
| dlgap4a | dlgap4 | other | upstream | 383568 | 55531033 ~ 55647541 (+) |
| G820665 | NA | other | upstream | 765171 | 55233258 ~ 55233798 (+) |
| G819897 | NA | other | upstream | 1271593 | 54726871 ~ 54727376 (+) |
| G821409 | pacsin1 | other | downstream | 33929 | 56061706 ~ 56063655 (+) |
| G822283 | NA | other | downstream | 544830 | 56572607 ~ 56572957 (+) |
| G822404 | NA | other | downstream | 734848 | 56762625 ~ 56763540 (+) |
