Gene
RNA
| Item | Value |
|---|---|
| gene id | G821433 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 56087603 ~ 56088983 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU934040 | True | 1055 | lncRNA | 0.36 | 3 | 56087603 | 56088983 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532424 | spdef | coding | upstream | 35615 | 56042832 ~ 56051988 (+) |
| LOC110532421 | cssa15h6orf106 | coding | upstream | 52450 | 56028537 ~ 56035153 (+) |
| taf11 | taf11 | coding | upstream | 127733 | 55957961 ~ 55959870 (+) |
| LOC110531209 | NA | coding | upstream | 258019 | 55827431 ~ 55829584 (+) |
| LOC110532416 | scube3 | coding | upstream | 260550 | 55703585 ~ 55827053 (+) |
| LOC110532428 | NA | coding | downstream | 14582 | 56103492 ~ 56112044 (+) |
| LOC110532426 | NA | coding | downstream | 30022 | 56119005 ~ 56124213 (+) |
| LOC110532427 | LOC106572343 | coding | downstream | 36771 | 56125754 ~ 56132936 (+) |
| LOC110531212 | LOC106567287 | coding | downstream | 157727 | 56246710 ~ 56463547 (+) |
| LOC110532433 | LOC106572420 | coding | downstream | 501708 | 56590691 ~ 56641983 (+) |
| G821408 | pacsin1 | non-coding | upstream | 31632 | 56052203 ~ 56055971 (+) |
| G821380 | NA | non-coding | upstream | 59826 | 55998969 ~ 56027777 (+) |
| G821393 | NA | non-coding | upstream | 68032 | 56018624 ~ 56019571 (+) |
| G821377 | NA | non-coding | upstream | 90865 | 55996516 ~ 55996738 (+) |
| G821371 | NA | non-coding | upstream | 102282 | 55985117 ~ 55985321 (+) |
| G821459 | NA | non-coding | downstream | 55833 | 56144816 ~ 56145130 (+) |
| G821464 | NA | non-coding | downstream | 62203 | 56151186 ~ 56151527 (+) |
| G821466 | NA | non-coding | downstream | 63544 | 56152527 ~ 56152755 (+) |
| G821476 | NA | non-coding | downstream | 73991 | 56162974 ~ 56163181 (+) |
| G821409 | pacsin1 | other | upstream | 23948 | 56061706 ~ 56063655 (+) |
| G821363 | uhrf1bp1 | other | upstream | 112287 | 55974042 ~ 55975316 (+) |
| G820944 | NA | other | upstream | 389625 | 55697640 ~ 55697978 (+) |
| dlgap4a | dlgap4 | other | upstream | 472202 | 55531033 ~ 55647541 (+) |
| G820665 | NA | other | upstream | 853805 | 55233258 ~ 55233798 (+) |
| G822283 | NA | other | downstream | 483624 | 56572607 ~ 56572957 (+) |
| G822404 | NA | other | downstream | 673642 | 56762625 ~ 56763540 (+) |
| LOC110532462 | LOC106572392 | other | downstream | 1253418 | 57342345 ~ 57958962 (+) |
