G821464


Basic Information

Item Value
gene id G821464
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 56151186 ~ 56151527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU934075
TTtattgctgccaccaccatgcttcaccgtagggatggtgccaggtttcctccaaacgtgacgcttgactttcaagccaaagagttcaatcttggttttgtcagaccagaaaatcttgttttgcatggtctgagagtcctttgggcGCCTTTTGGAAAAACTCCAagcggctgtcatgtgccttttactgaggagtggcttccgtctggccactctaccataaaggcctgattggtggagttctgcagagatggttgtccttctggaaggttctcccatctccacagaggaaatctggagctctgtcagagtgaccatcgggttattggtcacctccttgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU934075 True 342 lncRNA 0.50 1 56151186 56151527

Neighbor

gene id symbol gene type direction distance location
LOC110532427 LOC106572343 coding upstream 20773 56125754 ~ 56132936 (+)
LOC110532426 NA coding upstream 26973 56119005 ~ 56124213 (+)
LOC110532428 NA coding upstream 39142 56103492 ~ 56112044 (+)
LOC110532424 spdef coding upstream 99198 56042832 ~ 56051988 (+)
LOC110532421 cssa15h6orf106 coding upstream 116033 56028537 ~ 56035153 (+)
LOC110531212 LOC106567287 coding downstream 95183 56246710 ~ 56463547 (+)
LOC110532433 LOC106572420 coding downstream 439164 56590691 ~ 56641983 (+)
LOC110532435 LOC106572422 coding downstream 494253 56645780 ~ 56652084 (+)
LOC110532437 LOC106572423 coding downstream 510230 56661757 ~ 56708327 (+)
LOC110532442 eif4e3 coding downstream 679217 56830744 ~ 56839626 (+)
G821459 NA non-coding upstream 6056 56144816 ~ 56145130 (+)
G821433 NA non-coding upstream 62203 56087603 ~ 56088983 (+)
G821408 pacsin1 non-coding upstream 95215 56052203 ~ 56055971 (+)
G821380 NA non-coding upstream 123409 55998969 ~ 56027777 (+)
G821466 NA non-coding downstream 1000 56152527 ~ 56152755 (+)
G821476 NA non-coding downstream 11447 56162974 ~ 56163181 (+)
G821477 NA non-coding downstream 11894 56163421 ~ 56163755 (+)
G821520 NA non-coding downstream 73984 56225511 ~ 56231409 (+)
G822181 NA non-coding downstream 352687 56504214 ~ 56504475 (+)
G821409 pacsin1 other upstream 87531 56061706 ~ 56063655 (+)
G821363 uhrf1bp1 other upstream 175870 55974042 ~ 55975316 (+)
G820944 NA other upstream 453208 55697640 ~ 55697978 (+)
G822283 NA other downstream 421080 56572607 ~ 56572957 (+)
G822404 NA other downstream 611098 56762625 ~ 56763540 (+)
LOC110532462 LOC106572392 other downstream 1190874 57342345 ~ 57958962 (+)
G823373 NA other downstream 1877092 58028619 ~ 58028857 (+)
G823467 NA other downstream 2053736 58205263 ~ 58244984 (+)

Expression


Co-expression Network