Gene
RNA
| Item | Value |
|---|---|
| gene id | G821466 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 56152527 ~ 56152755 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU934077 | True | 229 | lncRNA | 0.37 | 1 | 56152527 | 56152755 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532427 | LOC106572343 | coding | upstream | 22114 | 56125754 ~ 56132936 (+) |
| LOC110532426 | NA | coding | upstream | 28314 | 56119005 ~ 56124213 (+) |
| LOC110532428 | NA | coding | upstream | 40483 | 56103492 ~ 56112044 (+) |
| LOC110532424 | spdef | coding | upstream | 100539 | 56042832 ~ 56051988 (+) |
| LOC110532421 | cssa15h6orf106 | coding | upstream | 117374 | 56028537 ~ 56035153 (+) |
| LOC110531212 | LOC106567287 | coding | downstream | 93955 | 56246710 ~ 56463547 (+) |
| LOC110532433 | LOC106572420 | coding | downstream | 437936 | 56590691 ~ 56641983 (+) |
| LOC110532435 | LOC106572422 | coding | downstream | 493025 | 56645780 ~ 56652084 (+) |
| LOC110532437 | LOC106572423 | coding | downstream | 509002 | 56661757 ~ 56708327 (+) |
| LOC110532442 | eif4e3 | coding | downstream | 677989 | 56830744 ~ 56839626 (+) |
| G821464 | NA | non-coding | upstream | 1000 | 56151186 ~ 56151527 (+) |
| G821459 | NA | non-coding | upstream | 7397 | 56144816 ~ 56145130 (+) |
| G821433 | NA | non-coding | upstream | 63544 | 56087603 ~ 56088983 (+) |
| G821408 | pacsin1 | non-coding | upstream | 96556 | 56052203 ~ 56055971 (+) |
| G821476 | NA | non-coding | downstream | 10219 | 56162974 ~ 56163181 (+) |
| G821477 | NA | non-coding | downstream | 10666 | 56163421 ~ 56163755 (+) |
| G821520 | NA | non-coding | downstream | 72756 | 56225511 ~ 56231409 (+) |
| G822181 | NA | non-coding | downstream | 351459 | 56504214 ~ 56504475 (+) |
| G822183 | NA | non-coding | downstream | 352358 | 56505113 ~ 56505347 (+) |
| G821409 | pacsin1 | other | upstream | 88872 | 56061706 ~ 56063655 (+) |
| G821363 | uhrf1bp1 | other | upstream | 177211 | 55974042 ~ 55975316 (+) |
| G820944 | NA | other | upstream | 454549 | 55697640 ~ 55697978 (+) |
| G822283 | NA | other | downstream | 419852 | 56572607 ~ 56572957 (+) |
| G822404 | NA | other | downstream | 609870 | 56762625 ~ 56763540 (+) |
| LOC110532462 | LOC106572392 | other | downstream | 1189646 | 57342345 ~ 57958962 (+) |
| G823373 | NA | other | downstream | 1875864 | 58028619 ~ 58028857 (+) |
| G823467 | NA | other | downstream | 2052508 | 58205263 ~ 58244984 (+) |
