G821477


Basic Information

Item Value
gene id G821477
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 56163421 ~ 56163755 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU934089
acattggaccatcgcagaggtgcaaatatgatgagaactacattgatttgggttcacttatattgggagtagtgcctttcctcagccacagtgtgttgtatgtgcaaaagtactatctcacaactcgatgaaaccttcactcttgcgcagacattcagaaacaaaacatgccatttTCAAAAATAAGCCATGGGAGTTTTTTGAGTGAGAATTAAGAagacttttgagtagtaagacatgtataaaagcaacagataccattaataagaaggggctagaagcgtcttatatggtgagctaccgagtggctaggacaggcaagccacatactattg

Function

NR:

description
PREDICTED: protein FAM200B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU934089 True 335 lncRNA 0.40 1 56163421 56163755

Neighbor

gene id symbol gene type direction distance location
LOC110532427 LOC106572343 coding upstream 33008 56125754 ~ 56132936 (+)
LOC110532426 NA coding upstream 39208 56119005 ~ 56124213 (+)
LOC110532428 NA coding upstream 51377 56103492 ~ 56112044 (+)
LOC110532424 spdef coding upstream 111433 56042832 ~ 56051988 (+)
LOC110532421 cssa15h6orf106 coding upstream 128268 56028537 ~ 56035153 (+)
LOC110531212 LOC106567287 coding downstream 82955 56246710 ~ 56463547 (+)
LOC110532433 LOC106572420 coding downstream 426936 56590691 ~ 56641983 (+)
LOC110532435 LOC106572422 coding downstream 482025 56645780 ~ 56652084 (+)
LOC110532437 LOC106572423 coding downstream 498002 56661757 ~ 56708327 (+)
LOC110532442 eif4e3 coding downstream 666989 56830744 ~ 56839626 (+)
G821476 NA non-coding upstream 240 56162974 ~ 56163181 (+)
G821466 NA non-coding upstream 10666 56152527 ~ 56152755 (+)
G821464 NA non-coding upstream 11894 56151186 ~ 56151527 (+)
G821459 NA non-coding upstream 18291 56144816 ~ 56145130 (+)
G821520 NA non-coding downstream 61756 56225511 ~ 56231409 (+)
G822181 NA non-coding downstream 340459 56504214 ~ 56504475 (+)
G822183 NA non-coding downstream 341358 56505113 ~ 56505347 (+)
G822187 NA non-coding downstream 343655 56507410 ~ 56507616 (+)
G822220 NA non-coding downstream 364981 56528736 ~ 56537038 (+)
G821409 pacsin1 other upstream 99766 56061706 ~ 56063655 (+)
G821363 uhrf1bp1 other upstream 188105 55974042 ~ 55975316 (+)
G820944 NA other upstream 465443 55697640 ~ 55697978 (+)
G822283 NA other downstream 408852 56572607 ~ 56572957 (+)
G822404 NA other downstream 598870 56762625 ~ 56763540 (+)
LOC110532462 LOC106572392 other downstream 1178646 57342345 ~ 57958962 (+)
G823373 NA other downstream 1864864 58028619 ~ 58028857 (+)
G823467 NA other downstream 2041508 58205263 ~ 58244984 (+)

Expression


Co-expression Network