G822183


Basic Information

Item Value
gene id G822183
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 56505113 ~ 56505347 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU934829
CTGAAAGACTATTATTGAGATATAGCATTTAATCCAAGCCCTTACACACTTAGATATTGCAACTACCAGGTGGCAATTTCATGATAAATGTTAATTTAACTTGCTTGCATGTATTTTTGTACAGCCATTATGCAATTTTTCCCCCtatgttttttgtttattttaatcTTGTCGGTTTAATAGTTTTGCTATTGTCCCACCCTATGGAACCTGTAATGGCAAGTTGCCTTTCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU934829 True 235 lncRNA 0.34 1 56505113 56505347

Neighbor

gene id symbol gene type direction distance location
LOC110531212 LOC106567287 coding upstream 41566 56246710 ~ 56463547 (+)
LOC110532427 LOC106572343 coding upstream 374700 56125754 ~ 56132936 (+)
LOC110532426 NA coding upstream 380900 56119005 ~ 56124213 (+)
LOC110532428 NA coding upstream 393069 56103492 ~ 56112044 (+)
LOC110532424 spdef coding upstream 453125 56042832 ~ 56051988 (+)
LOC110532433 LOC106572420 coding downstream 85344 56590691 ~ 56641983 (+)
LOC110532435 LOC106572422 coding downstream 140433 56645780 ~ 56652084 (+)
LOC110532437 LOC106572423 coding downstream 156410 56661757 ~ 56708327 (+)
LOC110532442 eif4e3 coding downstream 325397 56830744 ~ 56839626 (+)
LOC110532441 LOC106572418 coding downstream 334370 56839717 ~ 56863877 (+)
G822181 NA non-coding upstream 638 56504214 ~ 56504475 (+)
G821520 NA non-coding upstream 273704 56225511 ~ 56231409 (+)
G821477 NA non-coding upstream 341358 56163421 ~ 56163755 (+)
G821476 NA non-coding upstream 341932 56162974 ~ 56163181 (+)
G821466 NA non-coding upstream 352358 56152527 ~ 56152755 (+)
G822187 NA non-coding downstream 2063 56507410 ~ 56507616 (+)
G822220 NA non-coding downstream 23389 56528736 ~ 56537038 (+)
G822268 NA non-coding downstream 57315 56562662 ~ 56562889 (+)
G822269 NA non-coding downstream 57766 56563113 ~ 56563316 (+)
G822270 NA non-coding downstream 58097 56563444 ~ 56563665 (+)
G821409 pacsin1 other upstream 441458 56061706 ~ 56063655 (+)
G821363 uhrf1bp1 other upstream 529797 55974042 ~ 55975316 (+)
G820944 NA other upstream 807135 55697640 ~ 55697978 (+)
G822283 NA other downstream 67260 56572607 ~ 56572957 (+)
G822404 NA other downstream 257278 56762625 ~ 56763540 (+)
LOC110532462 LOC106572392 other downstream 837054 57342345 ~ 57958962 (+)
G823373 NA other downstream 1523272 58028619 ~ 58028857 (+)
G823467 NA other downstream 1699916 58205263 ~ 58244984 (+)

Expression


Co-expression Network