G822274



Basic Information


Item Value
gene id G822274
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 56565597 ~ 56565827 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU934923
gctacaataaatgcaacttcaggatgtatggtttccagtttacatagagtccagtgaagttccttgagggccgttgaGGTGTCTGCTAGAGGggtatatacacagctgtgacgataactgacgagaattctctaGGGAGATTCTGGACATTGGCTAGTAGTATACTCGGAAGTGGTATGCGGTTTGCAAACCTATGGGGCCTGACCAGGAGGTAGCTCCGTCTGCCTCTTC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU934923 True 231 lncRNA 0.48 1 56565597 56565827

Neighbor


gene id symbol gene type direction distance location
LOC110531212 LOC106567287 coding upstream 102050 56246710 ~ 56463547 (+)
LOC110532427 LOC106572343 coding upstream 435184 56125754 ~ 56132936 (+)
LOC110532426 NA coding upstream 441384 56119005 ~ 56124213 (+)
LOC110532428 NA coding upstream 453553 56103492 ~ 56112044 (+)
LOC110532424 spdef coding upstream 513609 56042832 ~ 56051988 (+)
LOC110532433 LOC106572420 coding downstream 24864 56590691 ~ 56641983 (+)
LOC110532435 LOC106572422 coding downstream 79953 56645780 ~ 56652084 (+)
LOC110532437 LOC106572423 coding downstream 95930 56661757 ~ 56708327 (+)
LOC110532442 eif4e3 coding downstream 264917 56830744 ~ 56839626 (+)
LOC110532441 LOC106572418 coding downstream 273890 56839717 ~ 56863877 (+)
G822270 NA non-coding upstream 1932 56563444 ~ 56563665 (+)
G822269 NA non-coding upstream 2281 56563113 ~ 56563316 (+)
G822268 NA non-coding upstream 2708 56562662 ~ 56562889 (+)
G822220 NA non-coding upstream 28559 56528736 ~ 56537038 (+)
G822187 NA non-coding upstream 57981 56507410 ~ 56507616 (+)
G822291 NA non-coding downstream 12616 56578443 ~ 56578656 (+)
G822354 NA non-coding downstream 86700 56652527 ~ 56654815 (+)
G822360 NA non-coding downstream 142736 56708563 ~ 56714483 (+)
G822362 NA non-coding downstream 151303 56717130 ~ 56718162 (+)
G821409 pacsin1 other upstream 501942 56061706 ~ 56063655 (+)
G821363 uhrf1bp1 other upstream 590281 55974042 ~ 55975316 (+)
G820944 NA other upstream 867619 55697640 ~ 55697978 (+)
G822283 NA other downstream 6780 56572607 ~ 56572957 (+)
G822404 NA other downstream 196798 56762625 ~ 56763540 (+)
LOC110532462 LOC106572392 other downstream 776574 57342345 ~ 57958962 (+)
G823373 NA other downstream 1462792 58028619 ~ 58028857 (+)
G823467 NA other downstream 1639436 58205263 ~ 58244984 (+)

Expression



Co-expression Network