Gene
RNA
| Item | Value |
|---|---|
| gene id | G822399 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 56758588 ~ 56758992 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU935056 | False | 405 | lncRNA | 0.48 | 1 | 56758588 | 56758992 |
| TU935058 | True | 317 | lncRNA | 0.46 | 1 | 56758588 | 56758904 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532437 | LOC106572423 | coding | upstream | 50261 | 56661757 ~ 56708327 (+) |
| LOC110532435 | LOC106572422 | coding | upstream | 106504 | 56645780 ~ 56652084 (+) |
| LOC110532433 | LOC106572420 | coding | upstream | 116605 | 56590691 ~ 56641983 (+) |
| LOC110531212 | LOC106567287 | coding | upstream | 295041 | 56246710 ~ 56463547 (+) |
| LOC110532427 | LOC106572343 | coding | upstream | 628175 | 56125754 ~ 56132936 (+) |
| LOC110532442 | eif4e3 | coding | downstream | 71752 | 56830744 ~ 56839626 (+) |
| LOC110532441 | LOC106572418 | coding | downstream | 80725 | 56839717 ~ 56863877 (+) |
| LOC110532445 | LOC106572414 | coding | downstream | 155590 | 56914582 ~ 56946999 (+) |
| LOC110532447 | lmod3 | coding | downstream | 188486 | 56947478 ~ 56948805 (+) |
| LOC110531214 | lmod3 | coding | downstream | 189812 | 56948804 ~ 56950054 (+) |
| G822390 | NA | non-coding | upstream | 11670 | 56746707 ~ 56746918 (+) |
| G822382 | NA | non-coding | upstream | 20201 | 56738064 ~ 56738387 (+) |
| G822381 | NA | non-coding | upstream | 22689 | 56735304 ~ 56735899 (+) |
| G822379 | NA | non-coding | upstream | 26362 | 56731793 ~ 56732226 (+) |
| G822361 | NA | non-coding | upstream | 28924 | 56721807 ~ 56729664 (+) |
| G822403 | NA | non-coding | downstream | 2397 | 56761389 ~ 56761679 (+) |
| G822412 | NA | non-coding | downstream | 16850 | 56775842 ~ 56776112 (+) |
| G822423 | NA | non-coding | downstream | 30706 | 56789698 ~ 56789931 (+) |
| G822434 | NA | non-coding | downstream | 45062 | 56804054 ~ 56804267 (+) |
| G822435 | NA | non-coding | downstream | 45688 | 56804680 ~ 56804905 (+) |
| G822283 | NA | other | upstream | 185631 | 56572607 ~ 56572957 (+) |
| LOC110532426 | NA | other | upstream | 634403 | 56119005 ~ 56124213 (+) |
| G821409 | pacsin1 | other | upstream | 694933 | 56061706 ~ 56063655 (+) |
| G821363 | uhrf1bp1 | other | upstream | 783272 | 55974042 ~ 55975316 (+) |
| G822404 | NA | other | downstream | 3633 | 56762625 ~ 56763540 (+) |
| LOC110532462 | LOC106572392 | other | downstream | 583409 | 57342345 ~ 57958962 (+) |
| G823373 | NA | other | downstream | 1269627 | 58028619 ~ 58028857 (+) |
| G823467 | NA | other | downstream | 1446271 | 58205263 ~ 58244984 (+) |
| G823459 | LOC106572386 | other | downstream | 1488122 | 58216176 ~ 58250307 (+) |
