G822412


Basic Information

Item Value
gene id G822412
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 56775842 ~ 56776112 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU935072
AAATAGAAATTATGGGGATCTTATGTTCAAAAACAAAGGTTCAATGACTGAATATGGCTTTTACATCAAGTCTTCATTTCCTGAAACATATGGCGACTACACTGCACCCTCTAACACCCTTTTGTTATGTTTTTATTCATTCACTTTTTGGTCAAGTTCAAAAACACTTGTAATAAACCGATCATCACAGTTCACTTCTTTGAACAAAATGCAATTTTTCACCAAGCAGCAGGCCATAAATCCTTGGTGGACGGAGGGTAGCCTTTTAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU935072 True 271 lncRNA 0.37 1 56775842 56776112

Neighbor

gene id symbol gene type direction distance location
LOC110532437 LOC106572423 coding upstream 67515 56661757 ~ 56708327 (+)
LOC110532435 LOC106572422 coding upstream 123758 56645780 ~ 56652084 (+)
LOC110532433 LOC106572420 coding upstream 133859 56590691 ~ 56641983 (+)
LOC110531212 LOC106567287 coding upstream 312295 56246710 ~ 56463547 (+)
LOC110532427 LOC106572343 coding upstream 645429 56125754 ~ 56132936 (+)
LOC110532442 eif4e3 coding downstream 54632 56830744 ~ 56839626 (+)
LOC110532441 LOC106572418 coding downstream 63605 56839717 ~ 56863877 (+)
LOC110532445 LOC106572414 coding downstream 138470 56914582 ~ 56946999 (+)
LOC110532447 lmod3 coding downstream 171366 56947478 ~ 56948805 (+)
LOC110531214 lmod3 coding downstream 172692 56948804 ~ 56950054 (+)
G822403 NA non-coding upstream 14163 56761389 ~ 56761679 (+)
G822399 NA non-coding upstream 16850 56758588 ~ 56758992 (+)
G822390 NA non-coding upstream 28924 56746707 ~ 56746918 (+)
G822382 NA non-coding upstream 37455 56738064 ~ 56738387 (+)
G822381 NA non-coding upstream 39943 56735304 ~ 56735899 (+)
G822423 NA non-coding downstream 13586 56789698 ~ 56789931 (+)
G822434 NA non-coding downstream 27942 56804054 ~ 56804267 (+)
G822435 NA non-coding downstream 28568 56804680 ~ 56804905 (+)
G822436 NA non-coding downstream 29002 56805114 ~ 56805324 (+)
G822438 NA non-coding downstream 30276 56806388 ~ 56808544 (+)
G822404 NA other upstream 12302 56762625 ~ 56763540 (+)
G822283 NA other upstream 202885 56572607 ~ 56572957 (+)
LOC110532426 NA other upstream 651657 56119005 ~ 56124213 (+)
G821409 pacsin1 other upstream 712187 56061706 ~ 56063655 (+)
LOC110532462 LOC106572392 other downstream 566289 57342345 ~ 57958962 (+)
G823373 NA other downstream 1252507 58028619 ~ 58028857 (+)
G823467 NA other downstream 1429151 58205263 ~ 58244984 (+)
G823459 LOC106572386 other downstream 1471002 58216176 ~ 58250307 (+)
LOC110532478 LOC106572378 other downstream 1612559 58385510 ~ 58390570 (+)

Expression


Co-expression Network