G822423


Basic Information

Item Value
gene id G822423
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 56789698 ~ 56789931 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU935083
ctataagCTAGATTTAGAGttttttggcaactttagttgtgaatgatacaaaccttagaatgtcttagaaatcaaaacatataggcctatgggctgtaTAGCGCGACTATACACTATTGATGATTTGAAAGAAGCaaaatgtcacgtcctgaccatagagagcatttattttctatggtagagtaggtcagggcgtacTAGGTTTATTtcctatgttggtgatttgtatgattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU935083 True 234 lncRNA 0.36 1 56789698 56789931

Neighbor

gene id symbol gene type direction distance location
LOC110532437 LOC106572423 coding upstream 81371 56661757 ~ 56708327 (+)
LOC110532435 LOC106572422 coding upstream 137614 56645780 ~ 56652084 (+)
LOC110532433 LOC106572420 coding upstream 147715 56590691 ~ 56641983 (+)
LOC110531212 LOC106567287 coding upstream 326151 56246710 ~ 56463547 (+)
LOC110532427 LOC106572343 coding upstream 659285 56125754 ~ 56132936 (+)
LOC110532442 eif4e3 coding downstream 40813 56830744 ~ 56839626 (+)
LOC110532441 LOC106572418 coding downstream 49786 56839717 ~ 56863877 (+)
LOC110532445 LOC106572414 coding downstream 124651 56914582 ~ 56946999 (+)
LOC110532447 lmod3 coding downstream 157547 56947478 ~ 56948805 (+)
LOC110531214 lmod3 coding downstream 158873 56948804 ~ 56950054 (+)
G822412 NA non-coding upstream 13586 56775842 ~ 56776112 (+)
G822403 NA non-coding upstream 28019 56761389 ~ 56761679 (+)
G822399 NA non-coding upstream 30706 56758588 ~ 56758992 (+)
G822390 NA non-coding upstream 42780 56746707 ~ 56746918 (+)
G822382 NA non-coding upstream 51311 56738064 ~ 56738387 (+)
G822434 NA non-coding downstream 14123 56804054 ~ 56804267 (+)
G822435 NA non-coding downstream 14749 56804680 ~ 56804905 (+)
G822436 NA non-coding downstream 15183 56805114 ~ 56805324 (+)
G822438 NA non-coding downstream 16457 56806388 ~ 56808544 (+)
G822470 NA non-coding downstream 80148 56870079 ~ 56871432 (+)
G822404 NA other upstream 26158 56762625 ~ 56763540 (+)
G822283 NA other upstream 216741 56572607 ~ 56572957 (+)
LOC110532426 NA other upstream 665513 56119005 ~ 56124213 (+)
G821409 pacsin1 other upstream 726043 56061706 ~ 56063655 (+)
LOC110532462 LOC106572392 other downstream 552470 57342345 ~ 57958962 (+)
G823373 NA other downstream 1238688 58028619 ~ 58028857 (+)
G823467 NA other downstream 1415332 58205263 ~ 58244984 (+)
G823459 LOC106572386 other downstream 1457183 58216176 ~ 58250307 (+)
LOC110532478 LOC106572378 other downstream 1598740 58385510 ~ 58390570 (+)

Expression


Co-expression Network