G822481


Basic Information

Item Value
gene id G822481
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 56891000 ~ 56891203 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU935181
tggggctccatgcaagatctcacctcgtggagttgcaatgatcatgagaacggtgaggaatcagcccataactacacgggaggatcttgtcaatgatctcaaggcagctgggaccatagtcaccaagaaaacaataggtaacacactacgccgtgaagcactgaaatcctgcagcgcccgcaaggtccccctgctcaagaaagc

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU935181 True 204 lncRNA 0.52 1 56891000 56891203

Neighbor

gene id symbol gene type direction distance location
LOC110532441 LOC106572418 coding upstream 27123 56839717 ~ 56863877 (+)
LOC110532442 eif4e3 coding upstream 51374 56830744 ~ 56839626 (+)
LOC110532437 LOC106572423 coding upstream 182673 56661757 ~ 56708327 (+)
LOC110532435 LOC106572422 coding upstream 238916 56645780 ~ 56652084 (+)
LOC110532433 LOC106572420 coding upstream 249017 56590691 ~ 56641983 (+)
LOC110532445 LOC106572414 coding downstream 23379 56914582 ~ 56946999 (+)
LOC110532447 lmod3 coding downstream 56275 56947478 ~ 56948805 (+)
LOC110531214 lmod3 coding downstream 57601 56948804 ~ 56950054 (+)
LOC110531215 uba3 coding downstream 67845 56959048 ~ 56979903 (+)
nfascb LOC106572405 coding downstream 228983 57120186 ~ 57136910 (+)
G822474 LOC106572415 non-coding upstream 12257 56878383 ~ 56878743 (+)
G822473 NA non-coding upstream 13209 56877327 ~ 56877791 (+)
G822471 NA non-coding upstream 18283 56872385 ~ 56872717 (+)
G822470 NA non-coding upstream 19568 56870079 ~ 56871432 (+)
G822438 NA non-coding upstream 82456 56806388 ~ 56808544 (+)
G822482 NA non-coding downstream 511 56891714 ~ 56891979 (+)
G822483 LOC106572415 non-coding downstream 1488 56892691 ~ 56907208 (+)
G822463 NA non-coding downstream 53093 56944296 ~ 56944813 (+)
G822870 LOC106572406 non-coding downstream 203235 57094438 ~ 57094913 (+)
G822888 NA non-coding downstream 259069 57150272 ~ 57150495 (+)
G822404 NA other upstream 127460 56762625 ~ 56763540 (+)
G822283 NA other upstream 318043 56572607 ~ 56572957 (+)
LOC110532427 LOC106572343 other upstream 758064 56125754 ~ 56132936 (+)
LOC110532426 NA other upstream 766815 56119005 ~ 56124213 (+)
G821409 pacsin1 other upstream 827345 56061706 ~ 56063655 (+)
LOC110532462 LOC106572392 other downstream 451198 57342345 ~ 57958962 (+)
G823373 NA other downstream 1137416 58028619 ~ 58028857 (+)
G823467 NA other downstream 1314060 58205263 ~ 58244984 (+)
G823459 LOC106572386 other downstream 1355911 58216176 ~ 58250307 (+)
LOC110532478 LOC106572378 other downstream 1497468 58385510 ~ 58390570 (+)

Expression


Co-expression Network