G822482


Basic Information

Item Value
gene id G822482
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 56891714 ~ 56891979 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU935182
ccttaatgacttggagaagatctgaaaagaggagtgggacaaaatccctcctgagatgtgtgcaaatctggtggccaactacaagaaaaagaaagggttttgccaccaagtactaagtcatgttttgcagaggggtcaaatacttatttccctcataaaaatgcaaatcaatttctaacatttttgacatgcgtttctctggattttgttgttgttattctgtctctcactgttcaaataaacctaccattaaaatgatagactga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU935182 True 266 lncRNA 0.37 1 56891714 56891979

Neighbor

gene id symbol gene type direction distance location
LOC110532441 LOC106572418 coding upstream 27837 56839717 ~ 56863877 (+)
LOC110532442 eif4e3 coding upstream 52088 56830744 ~ 56839626 (+)
LOC110532437 LOC106572423 coding upstream 183387 56661757 ~ 56708327 (+)
LOC110532435 LOC106572422 coding upstream 239630 56645780 ~ 56652084 (+)
LOC110532433 LOC106572420 coding upstream 249731 56590691 ~ 56641983 (+)
LOC110532445 LOC106572414 coding downstream 22603 56914582 ~ 56946999 (+)
LOC110532447 lmod3 coding downstream 55499 56947478 ~ 56948805 (+)
LOC110531214 lmod3 coding downstream 56825 56948804 ~ 56950054 (+)
LOC110531215 uba3 coding downstream 67069 56959048 ~ 56979903 (+)
nfascb LOC106572405 coding downstream 228207 57120186 ~ 57136910 (+)
G822481 NA non-coding upstream 511 56891000 ~ 56891203 (+)
G822474 LOC106572415 non-coding upstream 12971 56878383 ~ 56878743 (+)
G822473 NA non-coding upstream 13923 56877327 ~ 56877791 (+)
G822471 NA non-coding upstream 18997 56872385 ~ 56872717 (+)
G822470 NA non-coding upstream 20282 56870079 ~ 56871432 (+)
G822483 LOC106572415 non-coding downstream 712 56892691 ~ 56907208 (+)
G822463 NA non-coding downstream 52317 56944296 ~ 56944813 (+)
G822870 LOC106572406 non-coding downstream 202459 57094438 ~ 57094913 (+)
G822888 NA non-coding downstream 258293 57150272 ~ 57150495 (+)
G822889 LOC106562530 non-coding downstream 259976 57151955 ~ 57152271 (+)
G822404 NA other upstream 128174 56762625 ~ 56763540 (+)
G822283 NA other upstream 318757 56572607 ~ 56572957 (+)
LOC110532427 LOC106572343 other upstream 758778 56125754 ~ 56132936 (+)
LOC110532426 NA other upstream 767529 56119005 ~ 56124213 (+)
G821409 pacsin1 other upstream 828059 56061706 ~ 56063655 (+)
LOC110532462 LOC106572392 other downstream 450422 57342345 ~ 57958962 (+)
G823373 NA other downstream 1136640 58028619 ~ 58028857 (+)
G823467 NA other downstream 1313284 58205263 ~ 58244984 (+)
G823459 LOC106572386 other downstream 1355135 58216176 ~ 58250307 (+)
LOC110532478 LOC106572378 other downstream 1496692 58385510 ~ 58390570 (+)

Expression


Co-expression Network