G822463


Basic Information

Item Value
gene id G822463
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 56944296 ~ 56944813 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU935160
tggaagtggtgttagagggccagtaggaggcactctttcccctGGTCAAAATAAACATCTCAATTTCCAAGGGCAGTGATTggagacattgccctgtgtaggggttggatgttaaacaggtgtcctgactctctgtggtcactaaataTCTCATGGCATCTATCATAAGAGTAGGAGTGTCTTggataaattcccaatctggtcctcataccatcatggccacctaatcatccccagtttccaATTGACTCAttcatctcccctgtaactatgcCCAAGATTgaagctgtaaatgagaatgtgttctcagtcaacttaccaggTAAAAACATGCTCATATTTTTCTCCTCCCTATGCACAATGGCAGGTATTCTTGTGGATGTCATCTCTGTTGACTCTCTGTGTTTGCCTGTAATGACATTGAACCTCAGGACCATCCTAGCGTTCGTTGTCACCACTTACCACTATCCTTCCACCTGCTCTTAATATTCCtgcat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU935160 True 497 lncRNA 0.44 2 56944296 56944813

Neighbor

gene id symbol gene type direction distance location
LOC110532441 LOC106572418 coding upstream 80419 56839717 ~ 56863877 (+)
LOC110532442 eif4e3 coding upstream 104670 56830744 ~ 56839626 (+)
LOC110532437 LOC106572423 coding upstream 235969 56661757 ~ 56708327 (+)
LOC110532435 LOC106572422 coding upstream 292212 56645780 ~ 56652084 (+)
LOC110532433 LOC106572420 coding upstream 302313 56590691 ~ 56641983 (+)
LOC110532447 lmod3 coding downstream 2665 56947478 ~ 56948805 (+)
LOC110531214 lmod3 coding downstream 3991 56948804 ~ 56950054 (+)
LOC110531215 uba3 coding downstream 14235 56959048 ~ 56979903 (+)
nfascb LOC106572405 coding downstream 175373 57120186 ~ 57136910 (+)
mfsd4ab mfsd4a coding downstream 273182 57217995 ~ 57223278 (+)
G822483 LOC106572415 non-coding upstream 37088 56892691 ~ 56907208 (+)
G822482 NA non-coding upstream 52317 56891714 ~ 56891979 (+)
G822481 NA non-coding upstream 53093 56891000 ~ 56891203 (+)
G822474 LOC106572415 non-coding upstream 65553 56878383 ~ 56878743 (+)
G822473 NA non-coding upstream 66505 56877327 ~ 56877791 (+)
G822870 LOC106572406 non-coding downstream 149625 57094438 ~ 57094913 (+)
G822888 NA non-coding downstream 205459 57150272 ~ 57150495 (+)
G822889 LOC106562530 non-coding downstream 207142 57151955 ~ 57152271 (+)
G822892 NA non-coding downstream 210080 57154893 ~ 57155201 (+)
G822899 NA non-coding downstream 220108 57164921 ~ 57165144 (+)
G822404 NA other upstream 180756 56762625 ~ 56763540 (+)
G822283 NA other upstream 371339 56572607 ~ 56572957 (+)
LOC110532427 LOC106572343 other upstream 811360 56125754 ~ 56132936 (+)
LOC110532426 NA other upstream 820111 56119005 ~ 56124213 (+)
G821409 pacsin1 other upstream 880641 56061706 ~ 56063655 (+)
LOC110532462 LOC106572392 other downstream 397588 57342345 ~ 57958962 (+)
G823373 NA other downstream 1083806 58028619 ~ 58028857 (+)
G823467 NA other downstream 1260450 58205263 ~ 58244984 (+)
G823459 LOC106572386 other downstream 1302301 58216176 ~ 58250307 (+)
LOC110532478 LOC106572378 other downstream 1443858 58385510 ~ 58390570 (+)

Expression


Co-expression Network