G822888


Basic Information

Item Value
gene id G822888
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 57150272 ~ 57150495 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU935623
acctgtacgtcaaggctgagaaatgcctgttcttccaacaatccgtctccttcctagggtatcgcatttccacttcaggggtggagatggagagtgaccgcattgcagccgtgcgtaattggccaactcccaccacggtaaaggaggtttATCCGAGGTTTTGGTCAGGTgacggctcccattacctcactgctgaaagGAGGCCCGGTAcgcttgcagtggtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU935623 True 224 lncRNA 0.54 1 57150272 57150495

Neighbor

gene id symbol gene type direction distance location
nfascb LOC106572405 coding upstream 13362 57120186 ~ 57136910 (+)
LOC110531215 uba3 coding upstream 170369 56959048 ~ 56979903 (+)
LOC110531214 lmod3 coding upstream 200218 56948804 ~ 56950054 (+)
LOC110532447 lmod3 coding upstream 201467 56947478 ~ 56948805 (+)
LOC110532445 LOC106572414 coding upstream 203273 56914582 ~ 56946999 (+)
mfsd4ab mfsd4a coding downstream 67500 57217995 ~ 57223278 (+)
LOC110532457 LOC106572399 coding downstream 90838 57241333 ~ 57244702 (+)
LOC110532462 LOC106572392 coding downstream 191850 57342345 ~ 57958962 (+)
LOC118966205 NA coding downstream 212937 57363432 ~ 57363486 (+)
LOC110532463 LOC106572391 coding downstream 833694 57984189 ~ 58020592 (+)
G822870 LOC106572406 non-coding upstream 55359 57094438 ~ 57094913 (+)
G822463 NA non-coding upstream 205459 56944296 ~ 56944813 (+)
G822483 LOC106572415 non-coding upstream 243064 56892691 ~ 56907208 (+)
G822482 NA non-coding upstream 258293 56891714 ~ 56891979 (+)
G822481 NA non-coding upstream 259069 56891000 ~ 56891203 (+)
G822889 LOC106562530 non-coding downstream 1460 57151955 ~ 57152271 (+)
G822892 NA non-coding downstream 4398 57154893 ~ 57155201 (+)
G822899 NA non-coding downstream 14426 57164921 ~ 57165144 (+)
G822900 NA non-coding downstream 17643 57168138 ~ 57168355 (+)
G822866 NA non-coding downstream 18547 57169042 ~ 57170256 (+)
G822404 NA other upstream 386732 56762625 ~ 56763540 (+)
G822283 NA other upstream 577315 56572607 ~ 56572957 (+)
LOC110532427 LOC106572343 other upstream 1017336 56125754 ~ 56132936 (+)
LOC110532426 NA other upstream 1026087 56119005 ~ 56124213 (+)
G821409 pacsin1 other upstream 1086617 56061706 ~ 56063655 (+)
G823373 NA other downstream 878124 58028619 ~ 58028857 (+)
G823467 NA other downstream 1054768 58205263 ~ 58244984 (+)
G823459 LOC106572386 other downstream 1096619 58216176 ~ 58250307 (+)
LOC110532478 LOC106572378 other downstream 1238176 58385510 ~ 58390570 (+)

Expression


Co-expression Network