G822892


Basic Information

Item Value
gene id G822892
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 57154893 ~ 57155201 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU935627
gattaccttggccaaggaaaaatgctcactaacagggatgtaaacacatttgtgcaccaaatttgagaTAGATTCgatttttgtgtatatatatatatatatatatatatatatatacactgctcaaaaaaataaagggaacacttaaacaacacaatgtaactccaagtcaatcacacttctgtgaaatcaaactgtccacttaggaagcaacactgattgacaatagatttcacatgttgttgtgcaaatggaatagacaacaggtggaaattataggcaattagcaagacacccccaataaaggag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU935627 True 309 lncRNA 0.34 1 57154893 57155201

Neighbor

gene id symbol gene type direction distance location
nfascb LOC106572405 coding upstream 17983 57120186 ~ 57136910 (+)
LOC110531215 uba3 coding upstream 174990 56959048 ~ 56979903 (+)
LOC110531214 lmod3 coding upstream 204839 56948804 ~ 56950054 (+)
LOC110532447 lmod3 coding upstream 206088 56947478 ~ 56948805 (+)
LOC110532445 LOC106572414 coding upstream 207894 56914582 ~ 56946999 (+)
mfsd4ab mfsd4a coding downstream 62794 57217995 ~ 57223278 (+)
LOC110532457 LOC106572399 coding downstream 86132 57241333 ~ 57244702 (+)
LOC110532462 LOC106572392 coding downstream 187144 57342345 ~ 57958962 (+)
LOC118966205 NA coding downstream 208231 57363432 ~ 57363486 (+)
LOC110532463 LOC106572391 coding downstream 828988 57984189 ~ 58020592 (+)
G822889 LOC106562530 non-coding upstream 2622 57151955 ~ 57152271 (+)
G822888 NA non-coding upstream 4398 57150272 ~ 57150495 (+)
G822870 LOC106572406 non-coding upstream 59980 57094438 ~ 57094913 (+)
G822463 NA non-coding upstream 210080 56944296 ~ 56944813 (+)
G822483 LOC106572415 non-coding upstream 247685 56892691 ~ 56907208 (+)
G822899 NA non-coding downstream 9720 57164921 ~ 57165144 (+)
G822900 NA non-coding downstream 12937 57168138 ~ 57168355 (+)
G822866 NA non-coding downstream 13841 57169042 ~ 57170256 (+)
G822933 NA non-coding downstream 75203 57230404 ~ 57230752 (+)
G822960 NA non-coding downstream 121497 57276698 ~ 57277827 (+)
G822404 NA other upstream 391353 56762625 ~ 56763540 (+)
G822283 NA other upstream 581936 56572607 ~ 56572957 (+)
LOC110532427 LOC106572343 other upstream 1021957 56125754 ~ 56132936 (+)
LOC110532426 NA other upstream 1030708 56119005 ~ 56124213 (+)
G821409 pacsin1 other upstream 1091238 56061706 ~ 56063655 (+)
G823373 NA other downstream 873418 58028619 ~ 58028857 (+)
G823467 NA other downstream 1050062 58205263 ~ 58244984 (+)
G823459 LOC106572386 other downstream 1091913 58216176 ~ 58250307 (+)
LOC110532478 LOC106572378 other downstream 1233470 58385510 ~ 58390570 (+)

Expression


Co-expression Network