G822899



Basic Information


Item Value
gene id G822899
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 57164921 ~ 57165144 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU935634
aacttggacccgtacaaatcagctgggctagacaatctggaccctctctttctaaaactatccgccaccattgttgcaacccctattaccagtctgttcaaccgctctttcgtatcgtccgagttCCCTAacgattggaaagctgccgtagTCATCCTACTCTTCAAAGGGGGTCACACTATAGAcctaaactgttatagacctatatccatcctgccctgctt

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU935634 True 224 lncRNA 0.47 1 57164921 57165144

Neighbor


gene id symbol gene type direction distance location
nfascb LOC106572405 coding upstream 28011 57120186 ~ 57136910 (+)
LOC110531215 uba3 coding upstream 185018 56959048 ~ 56979903 (+)
LOC110531214 lmod3 coding upstream 214867 56948804 ~ 56950054 (+)
LOC110532447 lmod3 coding upstream 216116 56947478 ~ 56948805 (+)
LOC110532445 LOC106572414 coding upstream 217922 56914582 ~ 56946999 (+)
mfsd4ab mfsd4a coding downstream 52851 57217995 ~ 57223278 (+)
LOC110532457 LOC106572399 coding downstream 76189 57241333 ~ 57244702 (+)
LOC110532462 LOC106572392 coding downstream 177201 57342345 ~ 57958962 (+)
LOC118966205 NA coding downstream 198288 57363432 ~ 57363486 (+)
LOC110532463 LOC106572391 coding downstream 819045 57984189 ~ 58020592 (+)
G822892 NA non-coding upstream 9720 57154893 ~ 57155201 (+)
G822889 LOC106562530 non-coding upstream 12650 57151955 ~ 57152271 (+)
G822888 NA non-coding upstream 14426 57150272 ~ 57150495 (+)
G822870 LOC106572406 non-coding upstream 70008 57094438 ~ 57094913 (+)
G822463 NA non-coding upstream 220108 56944296 ~ 56944813 (+)
G822900 NA non-coding downstream 2994 57168138 ~ 57168355 (+)
G822866 NA non-coding downstream 3898 57169042 ~ 57170256 (+)
G822933 NA non-coding downstream 65260 57230404 ~ 57230752 (+)
G822960 NA non-coding downstream 111554 57276698 ~ 57277827 (+)
G822983 dcj11 non-coding downstream 174249 57339393 ~ 57341204 (+)
G822404 NA other upstream 401381 56762625 ~ 56763540 (+)
G822283 NA other upstream 591964 56572607 ~ 56572957 (+)
LOC110532427 LOC106572343 other upstream 1031985 56125754 ~ 56132936 (+)
LOC110532426 NA other upstream 1040736 56119005 ~ 56124213 (+)
G821409 pacsin1 other upstream 1101266 56061706 ~ 56063655 (+)
G823373 NA other downstream 863475 58028619 ~ 58028857 (+)
G823467 NA other downstream 1040119 58205263 ~ 58244984 (+)
G823459 LOC106572386 other downstream 1081970 58216176 ~ 58250307 (+)
LOC110532478 LOC106572378 other downstream 1223527 58385510 ~ 58390570 (+)

Expression



Co-expression Network