Gene
RNA
| Item | Value |
|---|---|
| gene id | G822960 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 57276698 ~ 57277827 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: F-box only protein 6-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU935704 | True | 539 | lncRNA | 0.39 | 2 | 57276698 | 57277827 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532457 | LOC106572399 | coding | upstream | 31996 | 57241333 ~ 57244702 (+) |
| mfsd4ab | mfsd4a | coding | upstream | 53420 | 57217995 ~ 57223278 (+) |
| nfascb | LOC106572405 | coding | upstream | 139788 | 57120186 ~ 57136910 (+) |
| LOC110531215 | uba3 | coding | upstream | 296795 | 56959048 ~ 56979903 (+) |
| LOC110531214 | lmod3 | coding | upstream | 326644 | 56948804 ~ 56950054 (+) |
| LOC110532462 | LOC106572392 | coding | downstream | 64518 | 57342345 ~ 57958962 (+) |
| LOC118966205 | NA | coding | downstream | 85605 | 57363432 ~ 57363486 (+) |
| LOC110532463 | LOC106572391 | coding | downstream | 706362 | 57984189 ~ 58020592 (+) |
| apex2 | apex2 | coding | downstream | 1008618 | 58286445 ~ 58290128 (+) |
| LOC110532471 | LOC106572384 | coding | downstream | 1020946 | 58298773 ~ 58321350 (+) |
| G822933 | NA | non-coding | upstream | 45946 | 57230404 ~ 57230752 (+) |
| G822866 | NA | non-coding | upstream | 106442 | 57169042 ~ 57170256 (+) |
| G822900 | NA | non-coding | upstream | 108343 | 57168138 ~ 57168355 (+) |
| G822899 | NA | non-coding | upstream | 111554 | 57164921 ~ 57165144 (+) |
| G822892 | NA | non-coding | upstream | 121497 | 57154893 ~ 57155201 (+) |
| G822983 | dcj11 | non-coding | downstream | 61566 | 57339393 ~ 57341204 (+) |
| G823125 | NA | non-coding | downstream | 293374 | 57571201 ~ 57571619 (+) |
| G823156 | NA | non-coding | downstream | 349074 | 57626901 ~ 57645625 (+) |
| G823202 | NA | non-coding | downstream | 434636 | 57712463 ~ 57713466 (+) |
| G823238 | NA | non-coding | downstream | 492572 | 57770399 ~ 57771483 (+) |
| G822404 | NA | other | upstream | 513158 | 56762625 ~ 56763540 (+) |
| G822283 | NA | other | upstream | 703741 | 56572607 ~ 56572957 (+) |
| LOC110532427 | LOC106572343 | other | upstream | 1143762 | 56125754 ~ 56132936 (+) |
| LOC110532426 | NA | other | upstream | 1152513 | 56119005 ~ 56124213 (+) |
| G821409 | pacsin1 | other | upstream | 1213043 | 56061706 ~ 56063655 (+) |
| G823373 | NA | other | downstream | 750792 | 58028619 ~ 58028857 (+) |
| G823467 | NA | other | downstream | 927436 | 58205263 ~ 58244984 (+) |
| G823459 | LOC106572386 | other | downstream | 969287 | 58216176 ~ 58250307 (+) |
| LOC110532478 | LOC106572378 | other | downstream | 1110844 | 58385510 ~ 58390570 (+) |
