G822983 (dcj11)


Basic Information

Item Value
gene id G822983
gene name dcj11
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 57339393 ~ 57341204 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU935727
CTCCCCCCATCCCTTAGCAGAGGTGACTCTCCGTAGTGCCAGGTTAATGTTTCCTCCTCCGTTTCCGTTGTGGGTTGACAGGGAGCCAGAGAGAACAGCTGTGTCTGTGGTGGTGAGGGGGGCCTCTATGGATTGTGATATGTGCATCTTGTTGATCTCAACATGTGGGAAGCCCCCTCCGGGCAAATCCTTGTAATCCTCCTCATAGCGATCAAAGAGGTCTGTGGCATCTACACCCACACTGATCATCCCCTTGGGATTGGTCCTCTGCTGTAGtcgcctctcctccctctctctctgcagacgcTCAAACTCCTCTCGGATCTCTACTGGAGTTCTTTTTCTCTCCACCACCTCCCATCCTTCAACATCCAGCCCTCTCTTGCCATAGATGTCATAGATGGCTCGTAACTGTGGGTCACTTAGGACCTCATAAGCTTGATGCACTAGGTTAAAGAGCTGCTCTGCCTGCCTCTTTAATTCTGGGTCTCTGTGCTTGTCTGGGTGGTAGAGCATGCACAGTCGCCTGTATGATCCCTTCAGCTCCTCCTGTGTCGCCTCTCTTCTGACATTAAGTAAAGAATAGTAATCGTTGTTGTCGATTTCATCGTCTTCTAAGGCCGGCGCCATGTTTACAACCTTTCATCTCCACTTCCGCTATGTCTCTGTGCAACACTTCCGC

Function

NR:

description
DnaJ homolog subfamily C member 11

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU935727 True 682 lncRNA 0.51 6 57339393 57341204

Neighbor

gene id symbol gene type direction distance location
LOC110532457 LOC106572399 coding upstream 94691 57241333 ~ 57244702 (+)
mfsd4ab mfsd4a coding upstream 116115 57217995 ~ 57223278 (+)
nfascb LOC106572405 coding upstream 202483 57120186 ~ 57136910 (+)
LOC110531215 uba3 coding upstream 359490 56959048 ~ 56979903 (+)
LOC110531214 lmod3 coding upstream 389339 56948804 ~ 56950054 (+)
LOC110532462 LOC106572392 coding downstream 1141 57342345 ~ 57958962 (+)
LOC118966205 NA coding downstream 22228 57363432 ~ 57363486 (+)
LOC110532463 LOC106572391 coding downstream 642985 57984189 ~ 58020592 (+)
apex2 apex2 coding downstream 945241 58286445 ~ 58290128 (+)
LOC110532471 LOC106572384 coding downstream 957569 58298773 ~ 58321350 (+)
G822960 NA non-coding upstream 61566 57276698 ~ 57277827 (+)
G822933 NA non-coding upstream 108641 57230404 ~ 57230752 (+)
G822866 NA non-coding upstream 169137 57169042 ~ 57170256 (+)
G822900 NA non-coding upstream 171038 57168138 ~ 57168355 (+)
G822899 NA non-coding upstream 174249 57164921 ~ 57165144 (+)
G823125 NA non-coding downstream 229997 57571201 ~ 57571619 (+)
G823156 NA non-coding downstream 285697 57626901 ~ 57645625 (+)
G823202 NA non-coding downstream 371259 57712463 ~ 57713466 (+)
G823238 NA non-coding downstream 429195 57770399 ~ 57771483 (+)
G823260 NA non-coding downstream 461352 57802556 ~ 57839380 (+)
G822404 NA other upstream 575853 56762625 ~ 56763540 (+)
G822283 NA other upstream 766436 56572607 ~ 56572957 (+)
LOC110532427 LOC106572343 other upstream 1206457 56125754 ~ 56132936 (+)
LOC110532426 NA other upstream 1215208 56119005 ~ 56124213 (+)
G821409 pacsin1 other upstream 1275738 56061706 ~ 56063655 (+)
G823373 NA other downstream 687415 58028619 ~ 58028857 (+)
G823467 NA other downstream 864059 58205263 ~ 58244984 (+)
G823459 LOC106572386 other downstream 905910 58216176 ~ 58250307 (+)
LOC110532478 LOC106572378 other downstream 1047467 58385510 ~ 58390570 (+)

Expression


Co-expression Network