G823156


Basic Information

Item Value
gene id G823156
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 57626901 ~ 57645625 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU935920
CATTCAGACGCTGGGACTaacattactacttctaacaatcatacactgggactaacactactacttctaacagtcataaactgggactaacactgctacttctaacattcagacactgggactaacagtactacttataagagtcatacactgggactaccactactacttctaacagtcatgcACTGGGACTaacattactacttctaacagtcatacactgggactaacagtactacttctaacagtcagacactgggactaacactactacttctaacagtcagacactgggactaccactactacttctaacagtcacacactgggactaacattcctacttctaacagtcagacacatgggactaccactactacttctaacagtcacacactgagactaacattactacttctaacagtcagacactgggactaacactactacttctaccagtCAGACACatgggactaccactactacttctaacattcAGACGCTGGGAATaacattactacttctaacagtcatacactgggactaacagtactacttctaacagtcagacactgggactaacagtactacttctaacagtcagacactggggctaaaagtactacttctaacagtcagacactgggactaacagtactacttctaacagtcacacactgggacataacactactacttctaacagtcaaacactgggactaacactactacttctaacagtcagacattgggacataacactactacttctaacagtcacacaccgggactaccactactacttctaacagtcagacactgggactaacactactacttctaacagtcagacactgcaactaacattactacttctaacagtcagacactgggactaacagtactacttctaacagtcagacactgggactaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU935920 True 936 lncRNA 0.42 2 57626901 57645625

Neighbor

gene id symbol gene type direction distance location
LOC118966205 NA coding upstream 263415 57363432 ~ 57363486 (+)
LOC110532457 LOC106572399 coding upstream 382199 57241333 ~ 57244702 (+)
mfsd4ab mfsd4a coding upstream 403623 57217995 ~ 57223278 (+)
nfascb LOC106572405 coding upstream 489991 57120186 ~ 57136910 (+)
LOC110531215 uba3 coding upstream 646998 56959048 ~ 56979903 (+)
LOC110532463 LOC106572391 coding downstream 338564 57984189 ~ 58020592 (+)
apex2 apex2 coding downstream 640820 58286445 ~ 58290128 (+)
LOC110532471 LOC106572384 coding downstream 653148 58298773 ~ 58321350 (+)
LOC110532474 LOC106572383 coding downstream 675976 58321601 ~ 58331563 (+)
LOC110532475 LOC106572379 coding downstream 715148 58360773 ~ 58382911 (+)
G823125 NA non-coding upstream 55282 57571201 ~ 57571619 (+)
G822983 dcj11 non-coding upstream 285697 57339393 ~ 57341204 (+)
G822960 NA non-coding upstream 349074 57276698 ~ 57277827 (+)
G822933 NA non-coding upstream 396149 57230404 ~ 57230752 (+)
G822866 NA non-coding upstream 456645 57169042 ~ 57170256 (+)
G823202 NA non-coding downstream 66838 57712463 ~ 57713466 (+)
G823238 NA non-coding downstream 124774 57770399 ~ 57771483 (+)
G823260 NA non-coding downstream 156931 57802556 ~ 57839380 (+)
LOC110532462 LOC106572392 non-coding downstream 297007 57342345 ~ 57958962 (+)
G823326 NA non-coding downstream 313759 57959384 ~ 57959706 (+)
G822404 NA other upstream 863361 56762625 ~ 56763540 (+)
G822283 NA other upstream 1053944 56572607 ~ 56572957 (+)
LOC110532427 LOC106572343 other upstream 1493965 56125754 ~ 56132936 (+)
LOC110532426 NA other upstream 1502716 56119005 ~ 56124213 (+)
G821409 pacsin1 other upstream 1563246 56061706 ~ 56063655 (+)
G823373 NA other downstream 382994 58028619 ~ 58028857 (+)
G823467 NA other downstream 559638 58205263 ~ 58244984 (+)
G823459 LOC106572386 other downstream 601489 58216176 ~ 58250307 (+)
LOC110532478 LOC106572378 other downstream 743046 58385510 ~ 58390570 (+)
G823580 LOC106567312 other downstream 873594 58519219 ~ 58535643 (+)

Expression


Co-expression Network