G823549


Basic Information

Item Value
gene id G823549
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 58334651 ~ 58334911 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU936354
ggagagagagtgttatgGTAGTGAAGGTGTGAACAAGGTCCAAATGTGCCTCATTTGTATTTCAAAAGTGAACGACTATTGCTTTATAGATATTTTCCATTACTTGTTgatatacacagagtgtacaaaacattaggaacaccttcctaatattgagttgcacctcccttttgccttcagaacaacCTAAATTAATCGGGGCATGatctctacaaggtgtcgaaagcgttctacagggatgctggtccatgttgactccaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU936354 True 261 lncRNA 0.40 1 58334651 58334911

Neighbor

gene id symbol gene type direction distance location
LOC110532474 LOC106572383 coding upstream 3088 58321601 ~ 58331563 (+)
LOC110532471 LOC106572384 coding upstream 13301 58298773 ~ 58321350 (+)
apex2 apex2 coding upstream 44523 58286445 ~ 58290128 (+)
LOC110532463 LOC106572391 coding upstream 314059 57984189 ~ 58020592 (+)
LOC110532462 LOC106572392 coding upstream 375689 57342345 ~ 57958962 (+)
LOC110532475 LOC106572379 coding downstream 25862 58360773 ~ 58382911 (+)
LOC110532478 LOC106572378 coding downstream 50599 58385510 ~ 58390570 (+)
LOC110532483 NA coding downstream 71234 58406145 ~ 58407959 (+)
LOC110532485 NA coding downstream 98210 58433121 ~ 58447861 (+)
LOC110532488 LOC106572433 coding downstream 113020 58447931 ~ 58496358 (+)
G823459 LOC106572386 non-coding upstream 84344 58216176 ~ 58250307 (+)
G823347 NA non-coding upstream 215885 58116974 ~ 58118766 (+)
G823409 NA non-coding upstream 240371 58093184 ~ 58094280 (+)
G823397 NA non-coding upstream 258714 58069667 ~ 58075937 (+)
G823378 NA non-coding upstream 295693 58038759 ~ 58038958 (+)
G823551 NA non-coding downstream 1530 58336441 ~ 58336705 (+)
G823496 LOC106567247 non-coding downstream 2832 58337743 ~ 58338492 (+)
G823552 NA non-coding downstream 3583 58338494 ~ 58340182 (+)
G823554 NA non-coding downstream 6492 58341403 ~ 58346542 (+)
G823556 NA non-coding downstream 12677 58347588 ~ 58347939 (+)
G823467 NA other upstream 89667 58205263 ~ 58244984 (+)
G823373 NA other upstream 305794 58028619 ~ 58028857 (+)
G822404 NA other upstream 1571111 56762625 ~ 56763540 (+)
G823580 LOC106567312 other downstream 184308 58519219 ~ 58535643 (+)
LOC110532492 LOC106572441 other downstream 333243 58668090 ~ 58671251 (+)
LOC110531219 LOC106572493 other downstream 349238 58684149 ~ 58720758 (+)
fkb1a fkb1a other downstream 519934 58854845 ~ 58856718 (+)

Expression


Co-expression Network