Gene
RNA
| Item | Value |
|---|---|
| gene id | G823554 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 58341403 ~ 58346542 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| semaphorin-3F-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU936363 | True | 584 | lncRNA | 0.48 | 2 | 58341403 | 58346542 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532474 | LOC106572383 | coding | upstream | 9840 | 58321601 ~ 58331563 (+) |
| LOC110532471 | LOC106572384 | coding | upstream | 20053 | 58298773 ~ 58321350 (+) |
| apex2 | apex2 | coding | upstream | 51275 | 58286445 ~ 58290128 (+) |
| LOC110532463 | LOC106572391 | coding | upstream | 320811 | 57984189 ~ 58020592 (+) |
| LOC118966205 | NA | coding | upstream | 977917 | 57363432 ~ 57363486 (+) |
| LOC110532475 | LOC106572379 | coding | downstream | 14231 | 58360773 ~ 58382911 (+) |
| LOC110532478 | LOC106572378 | coding | downstream | 38968 | 58385510 ~ 58390570 (+) |
| LOC110532483 | NA | coding | downstream | 59603 | 58406145 ~ 58407959 (+) |
| LOC110532485 | NA | coding | downstream | 86579 | 58433121 ~ 58447861 (+) |
| LOC110532488 | LOC106572433 | coding | downstream | 101389 | 58447931 ~ 58496358 (+) |
| G823552 | NA | non-coding | upstream | 1221 | 58338494 ~ 58340182 (+) |
| G823496 | LOC106567247 | non-coding | upstream | 2911 | 58337743 ~ 58338492 (+) |
| G823551 | NA | non-coding | upstream | 4698 | 58336441 ~ 58336705 (+) |
| G823549 | NA | non-coding | upstream | 6492 | 58334651 ~ 58334911 (+) |
| G823459 | LOC106572386 | non-coding | upstream | 91096 | 58216176 ~ 58250307 (+) |
| G823556 | NA | non-coding | downstream | 1046 | 58347588 ~ 58347939 (+) |
| G823498 | NA | non-coding | downstream | 44307 | 58390849 ~ 58391743 (+) |
| G823569 | NA | non-coding | downstream | 63714 | 58410256 ~ 58413624 (+) |
| G823600 | NA | non-coding | downstream | 95474 | 58442016 ~ 58442219 (+) |
| G823467 | NA | other | upstream | 96419 | 58205263 ~ 58244984 (+) |
| G823373 | NA | other | upstream | 312546 | 58028619 ~ 58028857 (+) |
| LOC110532462 | LOC106572392 | other | upstream | 425869 | 57342345 ~ 57958962 (+) |
| G822404 | NA | other | upstream | 1577863 | 56762625 ~ 56763540 (+) |
| G823580 | LOC106567312 | other | downstream | 172677 | 58519219 ~ 58535643 (+) |
| LOC110532492 | LOC106572441 | other | downstream | 321612 | 58668090 ~ 58671251 (+) |
| LOC110531219 | LOC106572493 | other | downstream | 337607 | 58684149 ~ 58720758 (+) |
| fkb1a | fkb1a | other | downstream | 508303 | 58854845 ~ 58856718 (+) |
