G823556



Basic Information


Item Value
gene id G823556
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 58347588 ~ 58347939 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU936366
CCCTTTTTGAACCAGCTGGTGTAGGAGACCCGTAACTCACATAATAAGATGTTATCGCTACATTCCTTAGATGAAAGGTCCCACACGAAAACAACGAAAATGCGTTTGAAAAAGTATTTAATGCTTAAACGTCCAATAAATTATACCTCTGTATATCATAGAGAGACACCGTTTCTAACGTCTCTCTCGATTTATttacaaacaacatgaaaaataTAACATAGATTTCCGATCAAGGATTATAAAATGATCATTCTAACAAATGTTGTCTTACTCCCATAGCCCTCATCCACCCGAAAATAAGTAAATAGCTTAATGTAGGTCCATATGTCCTCTCCTCGTGAGGGTCCTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU936366 True 352 lncRNA 0.37 1 58347588 58347939

Neighbor


gene id symbol gene type direction distance location
LOC110532474 LOC106572383 coding upstream 16025 58321601 ~ 58331563 (+)
LOC110532471 LOC106572384 coding upstream 26238 58298773 ~ 58321350 (+)
apex2 apex2 coding upstream 57460 58286445 ~ 58290128 (+)
LOC110532463 LOC106572391 coding upstream 326996 57984189 ~ 58020592 (+)
LOC118966205 NA coding upstream 984102 57363432 ~ 57363486 (+)
LOC110532475 LOC106572379 coding downstream 12834 58360773 ~ 58382911 (+)
LOC110532478 LOC106572378 coding downstream 37571 58385510 ~ 58390570 (+)
LOC110532483 NA coding downstream 58206 58406145 ~ 58407959 (+)
LOC110532485 NA coding downstream 85182 58433121 ~ 58447861 (+)
LOC110532488 LOC106572433 coding downstream 99992 58447931 ~ 58496358 (+)
G823554 NA non-coding upstream 1046 58341403 ~ 58346542 (+)
G823552 NA non-coding upstream 7406 58338494 ~ 58340182 (+)
G823496 LOC106567247 non-coding upstream 9096 58337743 ~ 58338492 (+)
G823551 NA non-coding upstream 10883 58336441 ~ 58336705 (+)
G823549 NA non-coding upstream 12677 58334651 ~ 58334911 (+)
G823498 NA non-coding downstream 42910 58390849 ~ 58391743 (+)
G823569 NA non-coding downstream 62317 58410256 ~ 58413624 (+)
G823600 NA non-coding downstream 94077 58442016 ~ 58442219 (+)
G823579 NA non-coding downstream 148813 58496752 ~ 58497838 (+)
G823459 LOC106572386 other upstream 97281 58216176 ~ 58250307 (+)
G823467 NA other upstream 102604 58205263 ~ 58244984 (+)
G823373 NA other upstream 318731 58028619 ~ 58028857 (+)
LOC110532462 LOC106572392 other upstream 432054 57342345 ~ 57958962 (+)
G822404 NA other upstream 1584048 56762625 ~ 56763540 (+)
G823580 LOC106567312 other downstream 171280 58519219 ~ 58535643 (+)
LOC110532492 LOC106572441 other downstream 320215 58668090 ~ 58671251 (+)
LOC110531219 LOC106572493 other downstream 336210 58684149 ~ 58720758 (+)
fkb1a fkb1a other downstream 506906 58854845 ~ 58856718 (+)

Expression



Co-expression Network