G823579


Basic Information

Item Value
gene id G823579
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 58496752 ~ 58497838 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU936407
AGAGGAGACAAAGTAAATTGTGATAGAAGTGAAGTGTTACTTTAGTttggaaggagagggaagaaggtTGAGGAACAGACTGAAAAACAGGACAGAGGATCAAATAATTAGTCTGAGGGGCGAAATCATAGAATGAAAACAAATGAGAGTCAGTGGTGACAGAGAGATAGAAtgtgagagaggtgagaggtacAGATACCTATTTTGGGAAAGTAGCACCAAAAACATGAATGCCTGTTTTTCACACTTCCCTAAATATCCAAAATGGACTTTATTGAAAATGCAAAGTCCCCTCCAACAGCCCAGCCTTAAACAAGAACcaatacaaaacaaatacaaGCATTACCACGGTGACCATTATCACCTAGGATACAATGTCATTCACAACCTTCCAACGAACTGAACTTCAGCTTTAAGTTAGCTTCATGTCCAAAATCCCAAGAAAAATGGATCATGAAATAATTCATTCCTACTTCAGTAAGTGGGTAAACAACTGGATCTCCTTGTCTGTCTGTTCGACAAGCTTGTGTCAAACTAGCATTTAATATAGCTGAGAACACATAGCATATTGACTGACTGAGTAACAGACTGACCTCAGAGAACTGGATCCCTAATTAAGACCAAAGATAACTGCTCTCCTATGACAATGCCAGCCAGCTTACACTCCAAAACACTTTcacagggaggatggagggaggtagatagagagaaagagggagggggtgtAAAGTACAGGGCAGAAGAGAGGAATGTGCTGGTATGTTCAAGGGGGATGGAGAATGAGACAGGAGTGTAGAATCTAGATGTAGGATCTCAAAGAGAATCAGTGTTAGTGTTTGAATGTGATAGGCAGGGGAGCTGTATAGAGGGGGGGTAGGCAGGGGAGCTGTATAGAGGGGGGGTAGGCAGGGGAGCAGCCTGCATTTCTTTCCACAGTTTGACAATGTCTTTCCGCCCAGAATCTGTCCATTCTATCCCTCTCCAAACGTTTGACCATTCTTTACTCCAGAGCTGCATCCATAACCATATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU936407 True 1030 lncRNA 0.43 2 58496752 58497838
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110532488 LOC106572433 coding upstream 394 58447931 ~ 58496358 (+)
LOC110532485 NA coding upstream 48891 58433121 ~ 58447861 (+)
LOC110532483 NA coding upstream 88793 58406145 ~ 58407959 (+)
LOC110532478 LOC106572378 coding upstream 107308 58385510 ~ 58390570 (+)
LOC110532475 LOC106572379 coding upstream 113841 58360773 ~ 58382911 (+)
LOC110532490 LOC106572439 coding downstream 158439 58656277 ~ 58665931 (+)
LOC110532492 LOC106572441 coding downstream 170252 58668090 ~ 58671251 (+)
LOC110532491 LOC106572442 coding downstream 173516 58671354 ~ 58674299 (+)
LOC110531219 LOC106572493 coding downstream 186432 58684149 ~ 58720758 (+)
LOC110532493 LOC106572443 coding downstream 230760 58728598 ~ 58741270 (+)
G823600 NA non-coding upstream 54533 58442016 ~ 58442219 (+)
G823569 NA non-coding upstream 83128 58410256 ~ 58413624 (+)
G823498 NA non-coding upstream 105009 58390849 ~ 58391743 (+)
G823556 NA non-coding upstream 148813 58347588 ~ 58347939 (+)
G823587 LOC106572434 non-coding downstream 39606 58537444 ~ 58538992 (+)
G824487 NA non-coding downstream 138735 58636573 ~ 58636827 (+)
G824495 NA non-coding downstream 143448 58641286 ~ 58641558 (+)
G824523 NA non-coding downstream 179855 58677693 ~ 58677980 (+)
G823459 LOC106572386 other upstream 246445 58216176 ~ 58250307 (+)
G823467 NA other upstream 251768 58205263 ~ 58244984 (+)
G823373 NA other upstream 467895 58028619 ~ 58028857 (+)
LOC110532462 LOC106572392 other upstream 581218 57342345 ~ 57958962 (+)
G823580 LOC106567312 other downstream 21381 58519219 ~ 58535643 (+)
fkb1a fkb1a other downstream 357007 58854845 ~ 58856718 (+)
ppdpfa LOC106572462 other downstream 527362 59025174 ~ 59028152 (+)

Expression

G823579 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
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G823579 Expression in each Bioproject

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G823579 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network