G824523


Basic Information

Item Value
gene id G824523
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 58677693 ~ 58677980 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU937518
ctcgtgtattttctgcactatgcaatgatatgggcagcgaccatgtaacgcttttacaacatacagaagtacgctggttatcaaggggcaaagtattgacacgtttttttaaatttagagacaagcttaaagttttatttactgaccataatcttcacttgtctgaccgcttgcatgatgacgagtttctcacacgactggcctatctggatgatgttttttctcgcctgaatgatctgaatctaggattacagggactctccgcaactatattcaatgggacaaaat

Function

NR:

description
PREDICTED: zinc finger BED domain-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU937518 True 288 lncRNA 0.40 1 58677693 58677980

Neighbor

gene id symbol gene type direction distance location
LOC110532491 LOC106572442 coding upstream 3394 58671354 ~ 58674299 (+)
LOC110532492 LOC106572441 coding upstream 6745 58668090 ~ 58671251 (+)
LOC110532490 LOC106572439 coding upstream 11762 58656277 ~ 58665931 (+)
LOC110532488 LOC106572433 coding upstream 181335 58447931 ~ 58496358 (+)
LOC110532485 NA coding upstream 229832 58433121 ~ 58447861 (+)
LOC110531219 LOC106572493 coding downstream 6290 58684149 ~ 58720758 (+)
LOC110532493 LOC106572443 coding downstream 50618 58728598 ~ 58741270 (+)
plp2 LOC106572444 coding downstream 67853 58745833 ~ 58755855 (+)
prickle3 LOC106572445 coding downstream 85685 58763665 ~ 58814538 (+)
LOC110532497 LOC106572446 coding downstream 139024 58817004 ~ 58823053 (+)
G824495 NA non-coding upstream 36135 58641286 ~ 58641558 (+)
G824487 NA non-coding upstream 40866 58636573 ~ 58636827 (+)
G823587 LOC106572434 non-coding upstream 138701 58537444 ~ 58538992 (+)
G823579 NA non-coding upstream 179855 58496752 ~ 58497838 (+)
G824524 NA non-coding downstream 215 58678195 ~ 58678429 (+)
G824549 NA non-coding downstream 67313 58745293 ~ 58745534 (+)
G824590 NA non-coding downstream 119902 58797882 ~ 58800399 (+)
G824598 NA non-coding downstream 169465 58847445 ~ 58851453 (+)
G824616 NA non-coding downstream 182150 58860130 ~ 58861007 (+)
G823580 LOC106567312 other upstream 142050 58519219 ~ 58535643 (+)
LOC110532478 LOC106572378 other upstream 287123 58385510 ~ 58390570 (+)
G823459 LOC106572386 other upstream 427386 58216176 ~ 58250307 (+)
G823467 NA other upstream 432709 58205263 ~ 58244984 (+)
fkb1a fkb1a other downstream 176865 58854845 ~ 58856718 (+)
ppdpfa LOC106572462 other downstream 347220 59025174 ~ 59028152 (+)
LOC118966079 NA other downstream 480601 59158581 ~ 59161748 (+)
LOC110532530 LOC106572481 other downstream 699126 59374974 ~ 59382411 (+)

Expression


Co-expression Network