G824590


Basic Information

Item Value
gene id G824590
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 58797882 ~ 58800399 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU937610
cctttgtttttgtatttatttagtatggtcagggcgtgagttgggtgggcagtctatgtttgtttttctatgttttggtctagttctatgttttcggcctagtatggttctcaatcagaggcaggtgtcattagttgtctctgattgagaatcatacttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtctttgtgtttgcaccagatagggctgtttttgttctcacgtttcttgttttcgttattttgttcatgtatagtgtcttcattaaaatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU937610 True 293 lncRNA 0.39 2 58797882 58800399

Neighbor

gene id symbol gene type direction distance location
plp2 LOC106572444 coding upstream 42027 58745833 ~ 58755855 (+)
LOC110532493 LOC106572443 coding upstream 56612 58728598 ~ 58741270 (+)
LOC110531219 LOC106572493 coding upstream 77124 58684149 ~ 58720758 (+)
LOC110532491 LOC106572442 coding upstream 123583 58671354 ~ 58674299 (+)
LOC110532492 LOC106572441 coding upstream 126934 58668090 ~ 58671251 (+)
LOC110532497 LOC106572446 coding downstream 16605 58817004 ~ 58823053 (+)
LOC110531221 NA coding downstream 21733 58822132 ~ 58843304 (+)
fkb1a fkb1a coding downstream 54482 58854845 ~ 58856718 (+)
LOC110532502 LOC106572453 coding downstream 127620 58928019 ~ 58937708 (+)
uckl1a LOC106572454 coding downstream 137390 58937789 ~ 58947479 (+)
G824549 NA non-coding upstream 52348 58745293 ~ 58745534 (+)
G824524 NA non-coding upstream 119453 58678195 ~ 58678429 (+)
G824523 NA non-coding upstream 119902 58677693 ~ 58677980 (+)
G824495 NA non-coding upstream 156324 58641286 ~ 58641558 (+)
G824598 NA non-coding downstream 47046 58847445 ~ 58851453 (+)
G824616 NA non-coding downstream 59731 58860130 ~ 58861007 (+)
G824617 NA non-coding downstream 60728 58861127 ~ 58863014 (+)
G824618 NA non-coding downstream 62743 58863142 ~ 58863399 (+)
G824619 NA non-coding downstream 63521 58863920 ~ 58864507 (+)
G823580 LOC106567312 other upstream 262239 58519219 ~ 58535643 (+)
LOC110532478 LOC106572378 other upstream 407312 58385510 ~ 58390570 (+)
G823459 LOC106572386 other upstream 547575 58216176 ~ 58250307 (+)
ppdpfa LOC106572462 other downstream 224801 59025174 ~ 59028152 (+)
LOC118966079 NA other downstream 358182 59158581 ~ 59161748 (+)
LOC110532530 LOC106572481 other downstream 576707 59374974 ~ 59382411 (+)
G824936 NA other downstream 613748 59414147 ~ 59415013 (+)

Expression


Co-expression Network