Gene
RNA
| Item | Value |
|---|---|
| gene id | G824616 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 58860130 ~ 58861007 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| syntaphilin-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU937636 | True | 531 | lncRNA | 0.50 | 2 | 58860130 | 58861007 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fkb1a | fkb1a | coding | upstream | 3412 | 58854845 ~ 58856718 (+) |
| LOC110531221 | NA | coding | upstream | 16826 | 58822132 ~ 58843304 (+) |
| LOC110532497 | LOC106572446 | coding | upstream | 37077 | 58817004 ~ 58823053 (+) |
| prickle3 | LOC106572445 | coding | upstream | 45592 | 58763665 ~ 58814538 (+) |
| plp2 | LOC106572444 | coding | upstream | 104275 | 58745833 ~ 58755855 (+) |
| LOC110532502 | LOC106572453 | coding | downstream | 67012 | 58928019 ~ 58937708 (+) |
| uckl1a | LOC106572454 | coding | downstream | 76782 | 58937789 ~ 58947479 (+) |
| LOC110532505 | LOC106572456 | coding | downstream | 104619 | 58965626 ~ 58973628 (+) |
| LOC110532506 | LOC106572457 | coding | downstream | 114462 | 58975469 ~ 58982674 (+) |
| LOC110532510 | LOC106572461 | coding | downstream | 152555 | 59013562 ~ 59018678 (+) |
| G824598 | NA | non-coding | upstream | 8677 | 58847445 ~ 58851453 (+) |
| G824590 | NA | non-coding | upstream | 59731 | 58797882 ~ 58800399 (+) |
| G824549 | NA | non-coding | upstream | 114596 | 58745293 ~ 58745534 (+) |
| G824524 | NA | non-coding | upstream | 181701 | 58678195 ~ 58678429 (+) |
| G824523 | NA | non-coding | upstream | 182150 | 58677693 ~ 58677980 (+) |
| G824617 | NA | non-coding | downstream | 120 | 58861127 ~ 58863014 (+) |
| G824618 | NA | non-coding | downstream | 2135 | 58863142 ~ 58863399 (+) |
| G824619 | NA | non-coding | downstream | 2913 | 58863920 ~ 58864507 (+) |
| G824640 | NA | non-coding | downstream | 33236 | 58894243 ~ 58902558 (+) |
| G824675 | NA | non-coding | downstream | 112895 | 58973902 ~ 58974353 (+) |
| LOC110531219 | LOC106572493 | other | upstream | 175620 | 58684149 ~ 58720758 (+) |
| LOC110532492 | LOC106572441 | other | upstream | 188879 | 58668090 ~ 58671251 (+) |
| G823580 | LOC106567312 | other | upstream | 324487 | 58519219 ~ 58535643 (+) |
| LOC110532478 | LOC106572378 | other | upstream | 469560 | 58385510 ~ 58390570 (+) |
| ppdpfa | LOC106572462 | other | downstream | 164193 | 59025174 ~ 59028152 (+) |
| LOC118966079 | NA | other | downstream | 297574 | 59158581 ~ 59161748 (+) |
| LOC110532530 | LOC106572481 | other | downstream | 516099 | 59374974 ~ 59382411 (+) |
| G824936 | NA | other | downstream | 553140 | 59414147 ~ 59415013 (+) |
| G825484 | NA | other | downstream | 737022 | 59598029 ~ 59598970 (+) |
