G824617


Basic Information

Item Value
gene id G824617
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 58861127 ~ 58863014 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU937637
GTGGAACTATATTACCCTAACATTTTCATACATCATCACTTGGGATCATCACACAGCAAAAAAATAATAGTGAGAGAAGGCAGCAGCAGTACCTGCGCTGACCTGCAGAGGGCTTCCGACTGGGAGGGAGTGACATGGGTGTGGACCACCACTATCGCTCTGCTGCTGGCTCCAAGATGAAGTCTAGGAAGATGGCTTACAGTTGGACTGTACAATACCATTTTTGCAGGCCGATAAATAGTCCTACATTGTGGAGTAGAATATGTCCCCTCCGGACTTGTGTATGGACGCTTGAGAACCGTCACCAGTGGCAAGTAGATGGTTACTGTGCTGCTGATGAGAGTCCATGCCGGGAGCCACctgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU937637 True 365 lncRNA 0.49 2 58861127 58863014

Neighbor

gene id symbol gene type direction distance location
fkb1a fkb1a coding upstream 4409 58854845 ~ 58856718 (+)
LOC110531221 NA coding upstream 17823 58822132 ~ 58843304 (+)
LOC110532497 LOC106572446 coding upstream 38074 58817004 ~ 58823053 (+)
prickle3 LOC106572445 coding upstream 46589 58763665 ~ 58814538 (+)
plp2 LOC106572444 coding upstream 105272 58745833 ~ 58755855 (+)
LOC110532502 LOC106572453 coding downstream 65005 58928019 ~ 58937708 (+)
uckl1a LOC106572454 coding downstream 74775 58937789 ~ 58947479 (+)
LOC110532505 LOC106572456 coding downstream 102612 58965626 ~ 58973628 (+)
LOC110532506 LOC106572457 coding downstream 112455 58975469 ~ 58982674 (+)
LOC110532510 LOC106572461 coding downstream 150548 59013562 ~ 59018678 (+)
G824616 NA non-coding upstream 120 58860130 ~ 58861007 (+)
G824598 NA non-coding upstream 9674 58847445 ~ 58851453 (+)
G824590 NA non-coding upstream 60728 58797882 ~ 58800399 (+)
G824549 NA non-coding upstream 115593 58745293 ~ 58745534 (+)
G824524 NA non-coding upstream 182698 58678195 ~ 58678429 (+)
G824618 NA non-coding downstream 128 58863142 ~ 58863399 (+)
G824619 NA non-coding downstream 906 58863920 ~ 58864507 (+)
G824640 NA non-coding downstream 31229 58894243 ~ 58902558 (+)
G824675 NA non-coding downstream 110888 58973902 ~ 58974353 (+)
G824706 NA non-coding downstream 166146 59029160 ~ 59029985 (+)
LOC110531219 LOC106572493 other upstream 176617 58684149 ~ 58720758 (+)
LOC110532492 LOC106572441 other upstream 189876 58668090 ~ 58671251 (+)
G823580 LOC106567312 other upstream 325484 58519219 ~ 58535643 (+)
LOC110532478 LOC106572378 other upstream 470557 58385510 ~ 58390570 (+)
ppdpfa LOC106572462 other downstream 162186 59025174 ~ 59028152 (+)
LOC118966079 NA other downstream 295567 59158581 ~ 59161748 (+)
LOC110532530 LOC106572481 other downstream 514092 59374974 ~ 59382411 (+)
G824936 NA other downstream 551133 59414147 ~ 59415013 (+)
G825484 NA other downstream 735015 59598029 ~ 59598970 (+)

Expression


Co-expression Network