G824760


Basic Information

Item Value
gene id G824760
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 59150878 ~ 59151503 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU937805
acgaTTATCTATATATCTCTACACACACCCTCTCACGTCCTCACCCCATTCTCTCCTACCCACAATCATATCTACACCTGGTTTCGGAAAGGGAGGAATGTTCTCCAATGCAATTGAAggccccatctttctctcccccagTCCATATTCTACCACTTTCTGCCTGATTGTCCACCCTGCTTATCCACTCCTCCCTCCCAGCATTCCCCAGTTGCTGTGACCGCAGGATGTCCTTCTGAACTCCCTTTCAACCTTGCCCAGTACGCTAATGCAAGTTTGGCCCGCTTTATCCTCAGTGGCAGTTCCCCACTATCCACCTACAATGCCTCAACAGGTGTTGTTCTGAAGGCACCCACACACAATCTCAGGGCCTTGACTGTATCGTATCCATGCACTGGAGTACCGTTTTGGCCACCAATCCATATACAAAGCACCCATAATCCACAGATGACCTGATCAATGCCTGATACATATATAACAGTGTTTGTCTATCCGATCCCCAATCATATCCTGCCACTGCTCTTATGAGGTTCAGCACCTTCATAtctgttatgggtgtaagatggcacagtgatgccatctgttggtaaatgttcattactgcaactcatGTGTTTTACCGGTGT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106528677, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU937805 True 626 lncRNA 0.48 1 59150878 59151503

Neighbor

gene id symbol gene type direction distance location
LOC110532516 mare3 coding upstream 14035 59132059 ~ 59136843 (+)
LOC110532515 LOC106572465 coding upstream 23903 59109495 ~ 59126975 (+)
ppdpfa LOC106572462 coding upstream 122726 59025174 ~ 59028152 (+)
LOC110532511 LOC106572500 coding upstream 126306 59018838 ~ 59024572 (+)
LOC110532510 LOC106572461 coding upstream 132200 59013562 ~ 59018678 (+)
LOC118966079 NA coding downstream 7202 59158581 ~ 59161748 (+)
LOC110532519 NA coding downstream 31544 59183047 ~ 59185601 (+)
LOC110531223 LOC106567210 coding downstream 36982 59188485 ~ 59190896 (+)
LOC110532529 LOC106572479 coding downstream 172072 59323575 ~ 59336156 (+)
LOC110532530 LOC106572481 coding downstream 223471 59374974 ~ 59382411 (+)
G824753 NA non-coding upstream 5130 59144278 ~ 59145748 (+)
G824755 NA non-coding upstream 11338 59138648 ~ 59139540 (+)
G824707 NA non-coding upstream 120410 59030203 ~ 59030468 (+)
G824706 NA non-coding upstream 120893 59029160 ~ 59029985 (+)
G824675 NA non-coding upstream 176525 58973902 ~ 58974353 (+)
G824761 NA non-coding downstream 2783 59154286 ~ 59154579 (+)
G824763 NA non-coding downstream 5451 59156954 ~ 59157374 (+)
G824764 NA non-coding downstream 5905 59157408 ~ 59157670 (+)
G824765 NA non-coding downstream 6545 59158048 ~ 59158265 (+)
fkb1a fkb1a other upstream 294179 58854845 ~ 58856718 (+)
LOC110531219 LOC106572493 other upstream 466368 58684149 ~ 58720758 (+)
LOC110532492 LOC106572441 other upstream 479627 58668090 ~ 58671251 (+)
G823580 LOC106567312 other upstream 615235 58519219 ~ 58535643 (+)
G824936 NA other downstream 262644 59414147 ~ 59415013 (+)
G825484 NA other downstream 446526 59598029 ~ 59598970 (+)
G825749 NA other downstream 858506 60010009 ~ 60010425 (+)

Expression


Co-expression Network