G824770


Basic Information

Item Value
gene id G824770
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 59166099 ~ 59166315 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU937815
gtttcctccagacatgacacttggcatttaggccaaagagttcaatcttgtttttatcagaccagagaatcttgtttctgatggtctgagagtctttagttgccttttcgcaaactccaagcaggctgtcatgtgccttttactaaggagtggcttccatctggccaatcTCTACCAGCAAGGCTtaattggtagagtgctgcagagatggttgtcc

Function

NR:

description
transposase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU937815 True 217 lncRNA 0.45 1 59166099 59166315

Neighbor

gene id symbol gene type direction distance location
LOC118966079 NA coding upstream 4351 59158581 ~ 59161748 (+)
LOC110532516 mare3 coding upstream 29256 59132059 ~ 59136843 (+)
LOC110532515 LOC106572465 coding upstream 39124 59109495 ~ 59126975 (+)
ppdpfa LOC106572462 coding upstream 137947 59025174 ~ 59028152 (+)
LOC110532511 LOC106572500 coding upstream 141527 59018838 ~ 59024572 (+)
LOC110532519 NA coding downstream 16732 59183047 ~ 59185601 (+)
LOC110531223 LOC106567210 coding downstream 22170 59188485 ~ 59190896 (+)
LOC110532529 LOC106572479 coding downstream 157260 59323575 ~ 59336156 (+)
LOC110532530 LOC106572481 coding downstream 208659 59374974 ~ 59382411 (+)
LOC110532531 LOC106572482 coding downstream 220549 59386864 ~ 59393869 (+)
G824769 NA non-coding upstream 214 59165591 ~ 59165885 (+)
G824765 NA non-coding upstream 7834 59158048 ~ 59158265 (+)
G824764 NA non-coding upstream 8429 59157408 ~ 59157670 (+)
G824763 NA non-coding upstream 8725 59156954 ~ 59157374 (+)
G824771 NA non-coding downstream 24 59166339 ~ 59166543 (+)
G824772 NA non-coding downstream 592 59166907 ~ 59167202 (+)
G824812 NA non-coding downstream 55320 59221635 ~ 59222002 (+)
G824814 NA non-coding downstream 58607 59224922 ~ 59225326 (+)
fkb1a fkb1a other upstream 309400 58854845 ~ 58856718 (+)
LOC110531219 LOC106572493 other upstream 481589 58684149 ~ 58720758 (+)
LOC110532492 LOC106572441 other upstream 494848 58668090 ~ 58671251 (+)
G824936 NA other downstream 247832 59414147 ~ 59415013 (+)
G825484 NA other downstream 431714 59598029 ~ 59598970 (+)
G825749 NA other downstream 843694 60010009 ~ 60010425 (+)
G826505 NA other downstream 1279715 60446030 ~ 60446534 (+)

Expression


Co-expression Network