G824771


Basic Information

Item Value
gene id G824771
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 59166339 ~ 59166543 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU937816
acagagaaactctgtcagagtcaccatcgggtttttggtcacctccacctcccacctccctcccgggtggccagctctaagaagagtggttcccaacttcttccatttaagaatgatggaggccactgtgttcttggggatcttcaatgctgcagacattttttggtacccttccccagatctgtgccttgacacaatcctgtct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU937816 True 205 lncRNA 0.51 1 59166339 59166543

Neighbor

gene id symbol gene type direction distance location
LOC118966079 NA coding upstream 4591 59158581 ~ 59161748 (+)
LOC110532516 mare3 coding upstream 29496 59132059 ~ 59136843 (+)
LOC110532515 LOC106572465 coding upstream 39364 59109495 ~ 59126975 (+)
ppdpfa LOC106572462 coding upstream 138187 59025174 ~ 59028152 (+)
LOC110532511 LOC106572500 coding upstream 141767 59018838 ~ 59024572 (+)
LOC110532519 NA coding downstream 16504 59183047 ~ 59185601 (+)
LOC110531223 LOC106567210 coding downstream 21942 59188485 ~ 59190896 (+)
LOC110532529 LOC106572479 coding downstream 157032 59323575 ~ 59336156 (+)
LOC110532530 LOC106572481 coding downstream 208431 59374974 ~ 59382411 (+)
LOC110532531 LOC106572482 coding downstream 220321 59386864 ~ 59393869 (+)
G824770 NA non-coding upstream 24 59166099 ~ 59166315 (+)
G824769 NA non-coding upstream 454 59165591 ~ 59165885 (+)
G824765 NA non-coding upstream 8074 59158048 ~ 59158265 (+)
G824764 NA non-coding upstream 8669 59157408 ~ 59157670 (+)
G824772 NA non-coding downstream 364 59166907 ~ 59167202 (+)
G824812 NA non-coding downstream 55092 59221635 ~ 59222002 (+)
G824814 NA non-coding downstream 58379 59224922 ~ 59225326 (+)
G824822 LOC106572477 non-coding downstream 70797 59237340 ~ 59299949 (+)
fkb1a fkb1a other upstream 309640 58854845 ~ 58856718 (+)
LOC110531219 LOC106572493 other upstream 481829 58684149 ~ 58720758 (+)
LOC110532492 LOC106572441 other upstream 495088 58668090 ~ 58671251 (+)
G824936 NA other downstream 247604 59414147 ~ 59415013 (+)
G825484 NA other downstream 431486 59598029 ~ 59598970 (+)
G825749 NA other downstream 843466 60010009 ~ 60010425 (+)
G826505 NA other downstream 1279487 60446030 ~ 60446534 (+)

Expression


Co-expression Network