G824772


Basic Information

Item Value
gene id G824772
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 59166907 ~ 59167202 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU937817
ggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU937817 True 296 lncRNA 0.40 1 59166907 59167202

Neighbor

gene id symbol gene type direction distance location
LOC118966079 NA coding upstream 5159 59158581 ~ 59161748 (+)
LOC110532516 mare3 coding upstream 30064 59132059 ~ 59136843 (+)
LOC110532515 LOC106572465 coding upstream 39932 59109495 ~ 59126975 (+)
ppdpfa LOC106572462 coding upstream 138755 59025174 ~ 59028152 (+)
LOC110532511 LOC106572500 coding upstream 142335 59018838 ~ 59024572 (+)
LOC110532519 NA coding downstream 15845 59183047 ~ 59185601 (+)
LOC110531223 LOC106567210 coding downstream 21283 59188485 ~ 59190896 (+)
LOC110532529 LOC106572479 coding downstream 156373 59323575 ~ 59336156 (+)
LOC110532530 LOC106572481 coding downstream 207772 59374974 ~ 59382411 (+)
LOC110532531 LOC106572482 coding downstream 219662 59386864 ~ 59393869 (+)
G824771 NA non-coding upstream 364 59166339 ~ 59166543 (+)
G824770 NA non-coding upstream 592 59166099 ~ 59166315 (+)
G824769 NA non-coding upstream 1022 59165591 ~ 59165885 (+)
G824765 NA non-coding upstream 8642 59158048 ~ 59158265 (+)
G824812 NA non-coding downstream 54433 59221635 ~ 59222002 (+)
G824814 NA non-coding downstream 57720 59224922 ~ 59225326 (+)
G824822 LOC106572477 non-coding downstream 70138 59237340 ~ 59299949 (+)
G824800 LOC106572475 non-coding downstream 95847 59263049 ~ 59264785 (+)
fkb1a fkb1a other upstream 310208 58854845 ~ 58856718 (+)
LOC110531219 LOC106572493 other upstream 482397 58684149 ~ 58720758 (+)
LOC110532492 LOC106572441 other upstream 495656 58668090 ~ 58671251 (+)
G824936 NA other downstream 246945 59414147 ~ 59415013 (+)
G825484 NA other downstream 430827 59598029 ~ 59598970 (+)
G825749 NA other downstream 842807 60010009 ~ 60010425 (+)
G826505 NA other downstream 1278828 60446030 ~ 60446534 (+)

Expression


Co-expression Network