G824858


Basic Information

Item Value
gene id G824858
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 59301881 ~ 59302177 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU937910
gagaaatgacagttccattactttaagacatgaaggtcagtcaatgtggaacatttcaagaacttttaatgtttcttcaagtgcatttgcaaaaaccatcaagcgctatgatgaaactggctctcaagagGATCGTCAATGGAAAAGAAGAGCCAGAGGTAACtcggctgcagaggataagttcattagttaccagcctcagaaattgcagcccaaataaatgcttcacagagttcaaataacagacacatctcaaaatcaactgttcagaagagactgcgtgaatcaggccttcat

Function

NR:

description
hypothetical protein EH28_10426

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU937910 True 297 lncRNA 0.40 1 59301881 59302177

Neighbor

gene id symbol gene type direction distance location
LOC110531223 LOC106567210 coding upstream 110985 59188485 ~ 59190896 (+)
LOC110532519 NA coding upstream 116280 59183047 ~ 59185601 (+)
LOC118966079 NA coding upstream 140133 59158581 ~ 59161748 (+)
LOC110532516 mare3 coding upstream 165038 59132059 ~ 59136843 (+)
LOC110532515 LOC106572465 coding upstream 174906 59109495 ~ 59126975 (+)
LOC110532529 LOC106572479 coding downstream 21398 59323575 ~ 59336156 (+)
LOC110532530 LOC106572481 coding downstream 72797 59374974 ~ 59382411 (+)
LOC110532531 LOC106572482 coding downstream 84687 59386864 ~ 59393869 (+)
LOC110532532 LOC106572483 coding downstream 126341 59428518 ~ 59437957 (+)
LOC110532533 NA coding downstream 162060 59464237 ~ 59468766 (+)
G824822 LOC106572477 non-coding upstream 1932 59237340 ~ 59299949 (+)
G824800 LOC106572475 non-coding upstream 37096 59263049 ~ 59264785 (+)
G824814 NA non-coding upstream 76555 59224922 ~ 59225326 (+)
G824812 NA non-coding upstream 79879 59221635 ~ 59222002 (+)
G824921 NA non-coding downstream 80921 59383098 ~ 59383402 (+)
G824934 NA non-coding downstream 110775 59412952 ~ 59413227 (+)
G824967 NA non-coding downstream 158173 59460350 ~ 59460837 (+)
ppdpfa LOC106572462 other upstream 273738 59025174 ~ 59028152 (+)
fkb1a fkb1a other upstream 445182 58854845 ~ 58856718 (+)
LOC110531219 LOC106572493 other upstream 617371 58684149 ~ 58720758 (+)
LOC110532492 LOC106572441 other upstream 630630 58668090 ~ 58671251 (+)
G824936 NA other downstream 111970 59414147 ~ 59415013 (+)
G825484 NA other downstream 295852 59598029 ~ 59598970 (+)
G825749 NA other downstream 707832 60010009 ~ 60010425 (+)
G826505 NA other downstream 1143853 60446030 ~ 60446534 (+)

Expression


Co-expression Network