G824921


Basic Information

Item Value
gene id G824921
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 59383098 ~ 59383402 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU937979
GTTTgcttttatttagctaggcaagtccgttataaacattcttatttgcaatgactgcATACACTGAcaaaacccagacgacgctgggccaattgtgcaccgccctactgGACTCCCAAGCACAGCTGCTTGTggtcaaattaaattgtatttgtcacatgcaccgaatacaacaggtgtagtagaccaaaTAGTCTGGGTACCCATTTGATTAGCTGATCAGGAGTCTTACAGCgtggggtagaagctatttaggagcctcttggacctagacttggcgctccggtactgcttgccgtgtggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU937979 True 305 lncRNA 0.47 1 59383098 59383402

Neighbor

gene id symbol gene type direction distance location
LOC110532530 LOC106572481 coding upstream 689 59374974 ~ 59382411 (+)
LOC110532529 LOC106572479 coding upstream 46942 59323575 ~ 59336156 (+)
LOC110531223 LOC106567210 coding upstream 192202 59188485 ~ 59190896 (+)
LOC110532519 NA coding upstream 197497 59183047 ~ 59185601 (+)
LOC118966079 NA coding upstream 221350 59158581 ~ 59161748 (+)
LOC110532531 LOC106572482 coding downstream 3462 59386864 ~ 59393869 (+)
LOC110532532 LOC106572483 coding downstream 45116 59428518 ~ 59437957 (+)
LOC110532533 NA coding downstream 80835 59464237 ~ 59468766 (+)
LOC110532534 LOC106572504 coding downstream 94825 59478227 ~ 59480332 (+)
LOC118966188 LOC106572505 coding downstream 104641 59488041 ~ 59492053 (+)
G824858 NA non-coding upstream 80921 59301881 ~ 59302177 (+)
G824822 LOC106572477 non-coding upstream 83149 59237340 ~ 59299949 (+)
G824800 LOC106572475 non-coding upstream 118313 59263049 ~ 59264785 (+)
G824814 NA non-coding upstream 157772 59224922 ~ 59225326 (+)
G824812 NA non-coding upstream 161096 59221635 ~ 59222002 (+)
G824934 NA non-coding downstream 29550 59412952 ~ 59413227 (+)
G824967 NA non-coding downstream 76948 59460350 ~ 59460837 (+)
ppdpfa LOC106572462 other upstream 354955 59025174 ~ 59028152 (+)
fkb1a fkb1a other upstream 526399 58854845 ~ 58856718 (+)
LOC110531219 LOC106572493 other upstream 698588 58684149 ~ 58720758 (+)
G824936 NA other downstream 30745 59414147 ~ 59415013 (+)
G825484 NA other downstream 214627 59598029 ~ 59598970 (+)
G825749 NA other downstream 626607 60010009 ~ 60010425 (+)
G826505 NA other downstream 1062628 60446030 ~ 60446534 (+)
G826653 NA other downstream 1179678 60563080 ~ 60563397 (+)

Expression


Co-expression Network