XLOC_027232 (si:dkey-117n7.5)


Basic Information

Item Value
gene id XLOC_027232
gene name si:dkey-117n7.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 15968483 ~ 15974910 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053643
ACTACTCTCTATAGCACTCTCAGTAATACTCTAATGTAACACTCTTATGACTTCTCTCAATTTAAATgattgtttttcctttttatttgaatgcatttgaatttaatttgGCAAATAAAGTTGCTCATGTTTTCAACTAAAGGAAAAGAAATCCTCCTGATGGTGAACACCAATGATCCAGATGATGGGAGCATCCTGAGGGAAGAGAAAAGAGTGGATTCTGCCTCTCGCTTTTTGCTCACCCGTCCCAAAGTGTGGGACGAAGAGGTGGAGGATGAAACAACTACAGTTCATCCTGCTGTTTCCGAGCCAACAACAGCATATGGCAACGTTACAAGTGCcagtgctgagagagctggagagCAGAGAGAAAAGAGACGTGTACTCAAGCTCCACtcagTGAATGTCGACTCGGCagctgaactctgtcttgaacccaTGTCCGAGGGCCACTGCACTGAATACGTCCTGCTCTGGTACTATTATGCCGTGTCAGGAGAATGCCGTCCTTTTGTGTACGGTGGCTGTGGAGGAAATGGGAACCGATTCAGCTCCAAACAGGACTGCCAGAGTACATGCATTCTGGGAAGGAGAGATTCTGGATCCTGAAGAAGGAAAATACATGCTATTTTAACAGCTAAACTGATGTTAACTTTACTGAAAATGCTATTTTTGTACATTTCCCATATGTATATTAGTCCATTATAGCTGTATGCGACAAAAACAATGTTCATAACTTCCTTATTCATCATGTATTGCACTTTTGTTGTAATACAAGGACATCAACAAATTCATAACACATGATCTTTACTTTAAGCCATACAGTTTTGTTGGTAtgattaaatgtgtaaatgttgatttacagtttaaaaaatgattaatttagttGTTAAATGCACTATTATTATAAGTGTCCTGTTTACCATTTTGCACTAATGGTTCGGTTTGTAATATGTTCCTAATCTGactgtttttaatataatatgtgAGATAATAAAAGAATGAACGGAATACATT

Function

symbol description
si:dkey-117n7.5 Predicted to enable serine-type endopeptidase inhibitor activity.

GO:

id name namespace
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-331 Predicted to enable serine-type endopeptidase inhibitor activity.

Ensembl:

ensembl_id ENSDARG00000089640

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053643 True 1017 mRNA 0.38 4 15968483 15974910

Neighbor

gene id symbol gene type direction distance location
XLOC_027229 col7a1l coding upstream 2223 15889437 ~ 15966260 (+)
XLOC_027231 si:dkey-117n7.3 coding upstream 23616 15944245 ~ 15944867 (+)
XLOC_027230 si:dkey-117n7.2 coding upstream 24636 15942075 ~ 15943847 (+)
XLOC_027228 NA coding upstream 87339 15869212 ~ 15881144 (+)
XLOC_027227 lrguk coding upstream 127684 15819728 ~ 15840799 (+)
XLOC_027233 ucn3l coding downstream 6186 15981096 ~ 15981539 (+)
XLOC_027234 copg2 coding downstream 8631 15983541 ~ 15996191 (+)
XLOC_027235 CR749763.5 coding downstream 26328 16001238 ~ 16004425 (+)
XLOC_027236 NA coding downstream 33313 16008223 ~ 16023375 (+)
XLOC_027237 NA coding downstream 62258 16037168 ~ 16073706 (+)
XLOC_027225 NA non-coding upstream 727770 15183505 ~ 15240713 (+)
XLOC_027224 NA non-coding upstream 854016 15104694 ~ 15114467 (+)
XLOC_027223 NA non-coding upstream 892431 15071474 ~ 15076052 (+)
XLOC_027214 NA non-coding upstream 1197898 14767982 ~ 14770585 (+)
XLOC_027238 NA non-coding downstream 215416 16190326 ~ 16211867 (+)
XLOC_027239 NA non-coding downstream 334166 16309076 ~ 16313899 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000020_02651610_02655540 NA coding CI01000020 null 2650788 ~ 2655540 (-)