G824934


Basic Information

Item Value
gene id G824934
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 59412952 ~ 59413227 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU937992
ttctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccattcatttttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccacc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU937992 True 276 lncRNA 0.43 1 59412952 59413227

Neighbor

gene id symbol gene type direction distance location
LOC110532531 LOC106572482 coding upstream 19083 59386864 ~ 59393869 (+)
LOC110532530 LOC106572481 coding upstream 30543 59374974 ~ 59382411 (+)
LOC110532529 LOC106572479 coding upstream 76796 59323575 ~ 59336156 (+)
LOC110531223 LOC106567210 coding upstream 222056 59188485 ~ 59190896 (+)
LOC110532519 NA coding upstream 227351 59183047 ~ 59185601 (+)
LOC110532532 LOC106572483 coding downstream 15291 59428518 ~ 59437957 (+)
LOC110532533 NA coding downstream 51010 59464237 ~ 59468766 (+)
LOC110532534 LOC106572504 coding downstream 65000 59478227 ~ 59480332 (+)
LOC118966188 LOC106572505 coding downstream 74816 59488041 ~ 59492053 (+)
LOC110532535 LOC106572485 coding downstream 93076 59506303 ~ 59520371 (+)
G824921 NA non-coding upstream 29550 59383098 ~ 59383402 (+)
G824858 NA non-coding upstream 110775 59301881 ~ 59302177 (+)
G824822 LOC106572477 non-coding upstream 113003 59237340 ~ 59299949 (+)
G824800 LOC106572475 non-coding upstream 148167 59263049 ~ 59264785 (+)
G824814 NA non-coding upstream 187626 59224922 ~ 59225326 (+)
G824967 NA non-coding downstream 47123 59460350 ~ 59460837 (+)
LOC118966079 NA other upstream 252756 59158581 ~ 59161748 (+)
ppdpfa LOC106572462 other upstream 384809 59025174 ~ 59028152 (+)
fkb1a fkb1a other upstream 556253 58854845 ~ 58856718 (+)
LOC110531219 LOC106572493 other upstream 728442 58684149 ~ 58720758 (+)
G824936 NA other downstream 920 59414147 ~ 59415013 (+)
G825484 NA other downstream 184802 59598029 ~ 59598970 (+)
G825749 NA other downstream 596782 60010009 ~ 60010425 (+)
G826505 NA other downstream 1032803 60446030 ~ 60446534 (+)
G826653 NA other downstream 1149853 60563080 ~ 60563397 (+)

Expression


Co-expression Network